Oryzomicrobium terrae: OTERR_01220
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Entry
OTERR_01220 CDS
T06190
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
otr
Oryzomicrobium terrae
Pathway
otr00550
Peptidoglycan biosynthesis
otr01100
Metabolic pathways
otr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OTERR_01220 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OTERR_01220 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
otr01011
]
OTERR_01220 (mrdA)
Enzymes [BR:
otr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
OTERR_01220 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
otr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
OTERR_01220 (mrdA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QEL63598
UniProt:
A0A5C1E5Q2
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Position
132142..134043
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AA seq
633 aa
AA seq
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MPHDFASQDREQSQFRFRLGFAGVAVLLCFTLLFIRFFYLQVLQHDYYATRAEDNRISLI
PIMPNRGLILDANGVVMARNYSAFTLEIIPSKSGDLDETIDALAAIIDIQPRDRRRFKKL
LDESKNFESIPIRTKLTDEEVARFAANRYRFPGVEVKARLFRQYPQGPLGAHAIGYINRI
NAKDVDWIEENEQSANYKGTEHIGKTGLEQHYEFDLHGVTGYEQVEVDAGGRAIRTLART
APIPGNNLTLTLDAKLQEVAEKAFGNRRGSLVAIEPSTGGILALVSTPTFDPNLFVDGID
PQSWKELNESLDKPMVNRALNGAYPPGSTFKPFMALAALETGKRTPGQAIADPGFFNFGG
HQFRDDKKGGHGMVDMYKSITQSCDTYYYMLANDMGIDNIAAFMKQLGLGQATGIDIAGE
SVGVLPSPEWKKRRFKRPEQQKWFAGETISIGIGQGYNAYTPLQLALATATLANNGVMYK
PHLVKYITDTRTGEKRLIEPKPLRTLPFKQQNIDTIKHAMVGVNKEGTGARAFAGAAYES
GGKTGTAQVFSLKGGNYKESATHERLRDHALFIAFAPADKPRIALVVLVENGGFGAQSAA
PIARQVLDYYLVGKEAKGPAAEDASGEESADVH
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatgacttcgccagccaggaccgggaacagtcccagtttcgctttcgcctcggc
tttgccggggtggccgtgctgctctgcttcaccctcctgttcatccgcttcttctacctg
caggtactgcagcacgactactatgccacccgggccgaggacaaccgcatctccctgatt
ccgatcatgcccaaccggggcctgatcctggatgccaacggggtggtgatggcgcgcaac
tattcggccttcaccctggagatcatcccctctaagagcggcgatctggacgagaccatc
gacgccctggccgccatcatcgacatccagccgcgggaccggcgccgcttcaagaaactg
ctcgatgagagcaagaacttcgagtcgatcccgatccgcaccaagctcaccgacgaggaa
gtggcgcgcttcgccgccaaccgctaccgcttccccggggtcgaggtgaaggcgcgcctg
ttccgccagtatccccagggccccctgggggcccacgccatcggctacatcaaccgcatc
aacgccaaggatgtggactggatcgaagagaacgaacaaagcgccaactacaagggcacc
gagcacatcggcaagaccggtctggagcagcactacgagttcgacctgcacggcgtgacc
ggttacgagcaggtcgaggtcgatgccggcggccgggccatccgcaccttggcgcgcacg
gcaccgattcccggcaacaacctgaccctgaccctggatgccaaactccaggaggtggcg
gaaaaggccttcggcaaccggcgcggttccctggtggcgatcgaaccgtccaccggcggc
atccttgccctggtgtccacccccactttcgaccccaacctgttcgtggacggcatcgac
ccgcagagctggaaggaactcaacgagtccctggacaagccgatggtgaaccgggccttg
aacggtgcctatccgcccggctccaccttcaagccgttcatggccctggctgccctggaa
acgggcaagcgcaccccggggcaggccatcgccgacccgggcttcttcaacttcggcggc
caccagttccgtgacgacaagaagggcgggcacggcatggtggacatgtacaagtcgatc
acccagtcctgcgatacctactactacatgctggccaacgacatgggcatcgacaacatc
gcggccttcatgaagcaactgggcttgggccaggccaccggcatcgacatcgccggtgag
tcggtgggggtgctgccgtcgccggaatggaagaagcgccgcttcaaacgccccgagcag
caaaaatggttcgccggtgaaaccatctcgatcggcatcggccagggctacaacgcctac
accccgttgcagctggccctggccaccgccaccctggccaacaacggcgtgatgtacaag
ccgcacctggtcaagtacatcaccgacacccgcaccggcgagaagcgcctgatcgaaccc
aagcccctgcgcaccctgcctttcaagcagcagaacatcgacaccatcaagcacgccatg
gtcggggtaaacaaggagggcaccggcgcccgggccttcgccggggccgcctacgagtcc
ggcggcaagaccggtacggcccaggtgttctcgctcaagggcggcaactacaaggaatcg
gccacccacgaacggctgcgcgaccacgccttgttcattgccttcgcccccgccgacaag
cccaggatcgccctggtggtgctggtggaaaacggcggtttcggcgcccagtcggcggca
ccgatcgcccgtcaggtgctcgactactacctggtcggcaaggaggccaaggggccggct
gccgaagacgcttccggagaagaaagtgccgacgttcattaa
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