Oryzomicrobium terrae: OTERR_04060
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Entry
OTERR_04060 CDS
T06190
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
otr
Oryzomicrobium terrae
Pathway
otr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OTERR_04060 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otr03400
]
OTERR_04060 (mutM)
Enzymes [BR:
otr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
OTERR_04060 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OTERR_04060 (mutM)
DNA repair and recombination proteins [BR:
otr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OTERR_04060 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QEL63882
UniProt:
A0A5C1E4Q1
LinkDB
All DBs
Position
complement(448560..449402)
Genome browser
AA seq
280 aa
AA seq
DB search
MPELPEVEVSRRGLLPHLPGMPCLGAITRAPRLRLPLPDLNALLEGRLLSAIHRRGKYLL
FEWTPRAGIAGDQEGWLIVHLGMSGSLRLVAADTPAAPHDHVDLRFPHTVLRYRDPRRFG
LMVWHAGPHPERDPRLAVLGIEPLDETFTGPWLHRALAGKTVAIKQALMDAHLVVGVGNI
YAAEALFRAGISPTAPAGRLSAARCAKLATAVRAVLAESIALGGSSVRDYVHSDGGMGGY
QLSCAVYGRAGAPCRVCATPIRQIRQGGRSTFYCPHCQAR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactccccgaagtcgaagtcagccgccgcggcctgctcccccacctgccgggc
atgccctgcctgggggcgataacccgggcgccccggctgcgcctgcccctgcccgacctc
aacgccctgctcgaaggccgcctgctgagcgccatccaccgccgcggcaagtacctgctg
ttcgaatggacacctcgcgccggcatcgccggcgaccaggaaggctggctgatcgtccac
ctcggcatgtccggcagcctgcgcctggtggcggccgacaccccggcggcgccccacgac
cacgtggacctgcgttttccccacaccgtgctgcgctaccgggacccgcgccgcttcggc
ctgatggtctggcatgctggcccccatccggaacgggacccgcgcctggcggtgctcggc
atcgagcccctggacgaaaccttcaccggcccctggctgcaccgcgccctggccggcaag
accgtggcgatcaagcaggccctgatggatgcgcacctggtggtcggggtcggcaacatt
tacgcggccgaagccctgttccgcgccggcatctcccccaccgcaccggccggccggctg
tcggcggcccgctgcgccaagctcgccaccgcggtccgcgccgtactggccgagtccatc
gccctgggcggcagctcggtgcgggattacgtgcacagcgacggcggcatggggggctat
caactcagctgcgccgtttacggccgggccggcgccccctgccgggtctgcgccacgccg
atccggcagatccgccagggcggccgctccaccttctattgccctcactgccaggcccgc
tga
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