Oryzomicrobium terrae: OTERR_04350
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Entry
OTERR_04350 CDS
T06190
Symbol
miaB
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
otr
Oryzomicrobium terrae
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otr03016
]
OTERR_04350 (miaB)
Enzymes [BR:
otr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
OTERR_04350 (miaB)
Transfer RNA biogenesis [BR:
otr03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
OTERR_04350 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QEL63911
UniProt:
A0A5C1E4R8
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All DBs
Position
complement(479349..480680)
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AA seq
443 aa
AA seq
DB search
MKKLYIKTFGCQMNEYDSDKMADVLDAAEGVVKTDNPEEADIILFNTCSVREKAQEKVFH
DLGRVRHLKQQNPDLVIGVGGCVASQEGDAIVARAPFVDVVFGPQTLHRLPQLIAERRSK
GKAAVDVSFPEIEKFDALPPARTEGATAFVSIMEGCSKYCTFCIVPYTRGEEVSRPFGDV
LTEVAGLADQGVKEVTLLGQNVNAYRGVMDGSSEIADLAMLIEYIADIPGIERIRYTTSH
PREMTQRLIDTYAKVPKLVSHLHLPVQAGSDQVLAAMKRGYTGLEYKSLIRKLRAARPDI
SLSSDFIVGFPGETEEDFEKTMKLIEDVGFDTSFSFVYSPRPGTPAVELADTTPQDVKLK
RLMRLQKRIEDQAQAISQAMVGTVQRVLVEGLSKKDPNELAGRTDNNRVVNFVGNPRLIH
QFVDVTITAALPHSLRGEIVVKE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaagctgtacatcaagacctttggctgccagatgaacgagtacgactcggacaag
atggccgacgtgctcgacgccgccgagggggtggtcaagaccgacaacccggaagaggcg
gacatcatcctcttcaacacctgctcggtgcgggagaaggcccaggaaaaggtcttccac
gacctgggccgggtgcgccacctgaagcagcagaacccggacctggtgatcggcgtcggc
ggctgcgtggccagccaggagggcgacgccatcgtcgcccgggcgcccttcgtcgacgtg
gtcttcggcccccagaccctgcaccggctgccccagttgatcgccgagcggcgcagcaag
ggcaaggcggcggtggacgtatccttccccgagatcgagaagttcgacgccctgccgccg
gcgcgcaccgagggcgccaccgccttcgtctcgatcatggaaggctgctccaagtactgc
accttctgcatcgtcccctacacccggggcgaagaagtgtcgcgccccttcggcgacgtg
ctcaccgaggtggccggcctggccgaccagggcgtcaaggaagtgaccctgctcggccag
aacgtgaacgcctaccggggcgtcatggacggctccagcgagatcgccgacctggccatg
ctgatcgagtacatcgccgatatccccggcatcgagcgcatccgctacaccacctcccac
ccgcgggagatgacccagcgcctgatcgacacctacgccaaggtgcccaagctggtgtcc
cacctgcacctgccggtgcaggccggctcggaccaggtgctggcggcgatgaagcgcggc
tacaccgggctcgaatacaagagcctgatccgcaagctgcgcgccgcgcgcccggacatt
tccctgtcctccgacttcatcgtcggcttccccggcgagaccgaggaagacttcgagaag
accatgaagctgatcgaggacgtgggcttcgacacctccttctccttcgtctactcgccc
cgccccggcaccccggcggtggagctggccgacaccacgccccaggacgtcaagctgaag
cgcctgatgcgcctgcaaaagcgcatcgaggaccaggcccaggccatctcccaggccatg
gtcggcaccgtgcagcgggtactggtggaagggctgtcgaagaaagaccccaacgagctg
gccggccgtaccgacaacaaccgggtggtgaacttcgtcggcaacccgcgcctgatccac
cagtttgtcgacgtgaccatcaccgccgccctgccccacagcctgcgcggcgaaatcgtg
gtcaaggagtaa
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