Oryzomicrobium terrae: OTERR_04880
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Entry
OTERR_04880 CDS
T06190
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
otr
Oryzomicrobium terrae
Pathway
otr00260
Glycine, serine and threonine metabolism
otr00460
Cyanoamino acid metabolism
otr00630
Glyoxylate and dicarboxylate metabolism
otr00670
One carbon pool by folate
otr00680
Methane metabolism
otr01100
Metabolic pathways
otr01110
Biosynthesis of secondary metabolites
otr01120
Microbial metabolism in diverse environments
otr01200
Carbon metabolism
otr01230
Biosynthesis of amino acids
otr01240
Biosynthesis of cofactors
otr04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
OTERR_04880 (glyA)
09102 Energy metabolism
00680 Methane metabolism
OTERR_04880 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
OTERR_04880 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
OTERR_04880 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
OTERR_04880 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
OTERR_04880 (glyA)
Enzymes [BR:
otr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
OTERR_04880 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
QEL63964
UniProt:
A0A5C1E5I0
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All DBs
Position
540078..541328
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AA seq
416 aa
AA seq
DB search
MFSAHDTLAKVDPELWQAIEAENRRQQDHIELIASENYVSHAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVAEQLAIDRLKKLFGAEAANVQPNSGSQANQAVLMAFAKPGDTIMGMS
LAEGGHLTHGMALNMSGKWFNVVSYGLNEKEEIDYDKMEALAREHKPRIIVAGASAYALR
IDFERFAKIAKEVGAIFWVDMAHYAGLIAAGYYPNPVPFADVVTSTTHKTLRGPRGGVIL
MKAEHEKALNSAIFPGLQGGPLMHVIAAKAVAFKEAASPEFKKYQEQVINNARVMAKVLG
EERGLRIVSGRTESHVFLIDLRAKKITGKEAEAALGKAHITVNKNGIPNDPEKPFVTSGI
RIGSPAMTTRGFTEIEAEQIAHLVADVLDAPNDEAVLERVRGDVAKLCGKFPVYSA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttctccgcgcacgacaccctggcgaaagtggatcccgaactctggcaggcgattgaa
gctgaaaatcgccgtcaacaggaccacatcgagctgattgcttctgaaaactacgtttcc
cacgcggtgatggaagcccagggctcccagctcaccaacaagtatgccgaaggttatccc
ggcaagcgctactacggcggctgtgagtacgtggacgtggccgagcagctcgccatcgac
cgcctgaagaagctgttcggcgccgaagccgccaacgtgcagcccaattccggctcccag
gccaaccaggccgtgctgatggccttcgccaagcccggcgacaccatcatgggcatgagc
ctggccgaaggcggacacctcacccacggcatggccctcaacatgtccggcaagtggttc
aacgtcgtctcctacggtctcaacgagaaggaagagatcgactacgacaagatggaagcc
ctggcccgcgagcacaagccgcgcatcatcgtcgccggtgcctccgcctacgccctgcgc
atcgacttcgagcgcttcgccaagatcgccaaggaagtcggcgccatcttctgggtggac
atggcccactacgccggcctgatcgccgccggctactacccgaacccggtgcccttcgcc
gacgtggtcacctccaccacccacaagaccctgcgcggtccccgtggcggtgtgatcctg
atgaaggccgagcacgaaaaggccctcaactccgccatcttccccggcctgcaaggcggc
cccctgatgcacgtcatcgccgccaaggccgtggccttcaaggaagccgcttcccccgag
ttcaagaagtaccaggagcaggtgatcaacaacgcccgcgtcatggccaaggtgctgggt
gaagagcgcggcctgcgcatcgtctccggccgtaccgagtcccacgtcttcctgatcgac
ctgcgcgccaagaagatcaccggcaaggaagccgaagccgccttgggcaaggctcacatc
acggtcaacaagaacggcatccccaacgatccggaaaagcccttcgtcacctccggtatc
cgcattggttccccggccatgaccacccgtggcttcaccgagatcgaagccgagcagatc
gcccacctggtggccgacgtgctcgacgcgccgaacgacgaagcggtgctggagcgggtg
cgcggcgacgtggccaagctctgcggcaagttcccggtctacagcgcctga
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