Oryzomicrobium terrae: OTERR_06710
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Entry
OTERR_06710 CDS
T06190
Symbol
rluF
Name
(GenBank) ribosomal large subunit pseudouridine synthase F
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
otr
Oryzomicrobium terrae
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
otr03009
]
OTERR_06710 (rluF)
Enzymes [BR:
otr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
OTERR_06710 (rluF)
Ribosome biogenesis [BR:
otr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OTERR_06710 (rluF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
QEL64147
UniProt:
A0A5C1E780
LinkDB
All DBs
Position
741152..743149
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AA seq
665 aa
AA seq
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MNDTKRPGAWKRGGSGRTGSGTRGGASLGGWPVKGLERPGSDSGGPRGPRDDRPPRGDFG
DRPRRDFADRGDRPNRPYGERDDRGDRGQRSPRPEGDRPRSFGDRPPRGDFGDRPRRDFA
DRGDRPNRPYGERGDRPPRPEGDRPRSFGDRPPRGDFGDRPRRDFADRGDRPNRPYGERG
DRPPRPEGDRPRSFGDRPPRGDFGDRPRRDFADRGDRPNRPYGERGDRPPRPEGDRPRSF
GDRPPRGDFGDRPRRPFDDRPRRDFAERGGDRPSRQGEERPRGFGDRPARGEYVERPRRE
FSDRGERPNRPYGDRGDRPPRPEGDRPRNFGDRPPRGDFADRPRRDFSDRPDRGDRPPRD
VADRPRRDTRGDFRDDRGYGDRAERGPRGEFGSRPERAPRHEFRDAPLESRAPLESPERV
FEDEGLVRVSKLMAERGICSRREADAYIERGWVFVNGERVAELGTRADPNAEITLSKEAR
RNQEQQVTVLLNKPVGYVSGQAEDGYEPAIVLIRPENRWSESGGPAFSPAHLRGMAPAGR
LDIDSVGLLVLTQDGRVARRIIGADSEVDKEYLVRVEGQLIDNGLALLNHGLELDGDPLE
PAQVEWINDDQLRFVLREGKKRQIRRMCELVGLKVVGLKRVRIGGVKLGNLPPGQWRYLE
EGEAF
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatactaaacggccgggcgcctggaagcgcggcggttccggccgcaccggtagc
ggcacgcgcggtggcgcctccctgggcggctggccggtgaaggggctggagcgtcccggc
agcgatagcggcggcccccgtggcccccgcgacgaccgcccgccccgcggcgacttcggt
gatcgtccgcgtcgcgatttcgccgaccgtggcgaccggccgaaccggccctacggcgaa
cgggacgaccgcggcgaccgtggccaacgctccccgcgcccggaaggagatcggccgcgc
agcttcggcgaccgcccgccccggggggattttggtgaccgtccgcgtcgggattttgcc
gaccgtggtgaccggccgaaccggccctatggcgaacggggtgatcgtcctccgcgcccg
gaaggggatcggccgcgcagctttggcgaccgcccgccccggggcgacttcggtgaccgt
ccgcgccgggattttgccgaccgtggcgaccggccgaaccggccctacggcgaacggggt
gaccgtcctccgcgcccggagggggatcggccgcgcagcttcggcgaccgtccgccccgg
ggtgattttggcgaccgtccgcgccgtgattttgccgaccgtggtgaccggccgaaccgg
ccctacggcgaacggggtgaccgtcctccgcgcccggaaggggatcgcccgcgcagcttt
ggcgaccgcccgccgcggggcgacttcggtgaccgtccccgccgtcccttcgacgaccgc
ccgcgccgcgactttgccgagcgcggtggcgaccgtccgtcgcgccagggcgaggagcgg
ccgcgtggttttggcgaccgtcccgcccggggcgaatacgtggagcgcccgcgccgggag
ttttccgaccggggcgagcggccgaaccggccctatggggaccggggtgatcgtcctccg
cgcccggaaggcgaccgcccgcgcaatttcggcgaccgtccgccccggggcgatttcgct
gaccgcccccgtcgcgatttttccgaccgccctgaccggggtgaccgtcccccgcgggac
gttgccgatcgcccccgccgcgatacccggggtgacttccgggacgaccgtggctatggc
gaccgggccgagcgtgggccgcgtggtgaattcggcagtcgtccggaacgggcgccgcgc
cacgagttccgcgatgcccccctggaaagccgcgccccgcttgaatctcccgagcgggtc
tttgaagatgaaggactggtgcgggtttccaagctgatggccgagcggggcatctgctcc
cgccgcgaagccgacgcctacatcgagcgcggttgggtgttcgtcaacggcgagcgggtg
gccgagctgggcacccgggccgatcccaacgccgagatcaccctgtccaaggaagcccgg
cgcaaccaggagcaacaagtcaccgtgctgctcaacaagccggtgggctacgtctccggc
caggccgaggacggctacgagccggccatcgtgctgatccgcccggaaaatcgctggtcc
gaatccggcggcccggccttctcgccggcccacctgcgcggcatggcgccggcggggcgg
ctggatatcgattcggtgggcctgttggtgctgacccaggacggccgcgtcgcccggcgc
atcatcggcgccgattccgaggtggacaaggagtacctggtgcgggtcgaggggcaactc
atcgacaacggcctggccctgctcaaccacggcctggaactggacggcgacccgctggaa
ccggcccaggtggaatggatcaacgacgaccagctgcgctttgtcctgcgcgaaggcaag
aagcgccagatccgccgtatgtgcgagctggtgggcctgaaggtggtgggcctgaagcgg
gtgcgcatcggtggcgtcaagctcggcaacctgccgccggggcagtggcgctacctggag
gaaggcgaggccttctaa
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