Oryzomicrobium terrae: OTERR_08840
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Entry
OTERR_08840 CDS
T06190
Symbol
fliA
Name
(GenBank) RNA polymerase factor sigma-28 subunit
KO
K02405
RNA polymerase sigma factor FliA
Organism
otr
Oryzomicrobium terrae
Pathway
otr02020
Two-component system
otr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OTERR_08840 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OTERR_08840 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otr03021
]
OTERR_08840 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
otr02035
]
OTERR_08840 (fliA)
Transcription machinery [BR:
otr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OTERR_08840 (fliA)
Bacterial motility proteins [BR:
otr02035
]
Flagellar system
Flagellar assembly proteins
Stator
OTERR_08840 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
TRIP4_3rd
Motif
Other DBs
NCBI-ProteinID:
QEL64360
UniProt:
A0A5C1E634
LinkDB
All DBs
Position
966263..967012
Genome browser
AA seq
249 aa
AA seq
DB search
MYTPAGQLDREQLIQHFAPLVKRIAHHLMARLPASVQVDDLVQNGMIGLLDAIGRYESGL
GAQFETYATQRIRGAMLDGLRENDWLPRGIRRELRRVEKALHQLEHAQGRSPTELELAEA
LGMPLADYQRLLLEARGHQILYFEDFSEEEGESFLDRHVSDDDTTPLQQLEEQALRQALV
EGIDALPEREKLVMALYYEEELNLREIGEVLGVTESRVCQLHSQAIARLRARVLGEEGKV
KKTKKGRHG
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtatacccccgccggacagctggacagggagcagctgatccagcattttgccccgctc
gtcaaacgtatcgcccatcacctgatggcgcggttgcctgcgagcgtgcaggtggatgac
ctggtccaaaacggcatgatcggcctgctcgatgccatcggccgctacgagagcggactc
ggcgcccagttcgaaacctatgccacccagcgcattcgcggtgccatgcttgatggcttg
cgcgagaacgattggctgccgcggggaatccggcgtgagttacgccgcgtcgaaaaggcg
ctacatcagttggaacatgcccaggggcgttccccgacggagctggaactggccgaggcc
ttaggtatgcccttggcggactaccagcgtctgctcctggaggcacgggggcatcagatc
ctctatttcgaggatttctccgaagaagaaggcgagtcgttcctcgatcgccacgtcagc
gacgacgacaccacgccgttgcaacagctggaagagcaggccctgcggcaagccctggtc
gaaggaatcgatgcgctcccggagcgggaaaagctggtgatggcgctgtactacgaagaa
gaactaaatctgcgcgagatcggtgaagtcctcggagtcaccgaatcgcgcgtctgccag
ctgcacagccaggcgattgcccggctgcgtgcccgagtcctgggcgaggaggggaaagtg
aagaaaaccaagaaggggcgtcatggataa
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integrated database retrieval system
