Oryzomicrobium terrae: OTERR_12500
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Entry
OTERR_12500 CDS
T06190
Symbol
rluB
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
otr
Oryzomicrobium terrae
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
otr03009
]
OTERR_12500 (rluB)
Enzymes [BR:
otr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
OTERR_12500 (rluB)
Ribosome biogenesis [BR:
otr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OTERR_12500 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QEL64726
UniProt:
A0A5C1E729
LinkDB
All DBs
Position
1386873..1388270
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AA seq
465 aa
AA seq
DB search
MPYNKSKSPKNSAPRDGQEGAAGGRPEGRKGPRRPFRNRPPRGEGQGGSERSAQAGAGGD
VRPPRQSGEGRPPRNGNGPEGSRGPRPPRPEGAGGSGGGKSFGRGGRRRPDGESREVNGN
VAERQERRGSSDGGRGEGRPERRFEGEGSQPKRGPVRRAKRIAAPGEEKRGPGKGAPRGK
IKGPVEPTKPERLHKVLAQAGVGSRREMEEWILSGRVSVNGLPAEVGQLVGPTDRVKVNG
KLLNLKFANRVPRVIMYHKPEGQIVSRDDPDGRETVFEALPVLRGGRWIAVGRLDFNTSG
LLLFTTSGELANRLMHPRYNIIREYAVRVLGDLTDEAQDQLVDGIELEDGPARFSTLEDA
GGEGANRWYHVTLSEGRNREVRRMFEAVGVTVSRLMRVRYGPLIMPSRLKRGQWMELPEH
DVAALFQAVGMSVPGTGNNAFRRGMTGVYTGNDNSSQGRPPRGMR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgccttacaacaaatctaagagccccaagaacagcgccccccgtgacggccaggaaggc
gccgccggcggccgtccggaaggccgcaagggaccgcgccgtccgttccgtaaccgcccg
ccccgtggcgaaggtcaggggggaagtgagcgcagtgcgcaagcaggagcgggcggcgac
gttcgccccccccgccagtccggtgaaggacgccctcctcgtaatggcaatggaccggaa
ggctcccgtggtccgcgtccaccgcgccccgaaggtgcaggtggttcgggcggtggcaag
tcgtttggccgcggtggccgccgccgtccggatggtgaaagtcgggaggtaaacggcaac
gtggcggaacgccaggaacggcgcggatcttccgatggtggccgtggcgaggggcgccct
gagcggcgtttcgaaggggagggttcccagcccaagcgggggcccgtccgccgggccaag
cggattgccgctcccggcgaagaaaagcgcggtcctggcaaaggggcgccccgcggcaag
atcaaggggccggtcgagccgaccaagcccgagcgtctgcataaagtgctggcccaggca
ggtgtcggctcgcgccgggagatggaggaatggattctctccggccgggtcagcgtcaat
ggcttgcctgccgaagtggggcagctggtggggccgacggaccgggtcaaggtcaatggc
aaactgctcaacctgaaattcgccaaccgggtgccgcgcgtgatcatgtatcacaagccg
gaaggccagatcgtttcccgagacgacccggatggccgtgaaaccgtctttgaggccttg
ccggtcctgcggggtgggcgttggatcgccgttggccgcctcgacttcaataccagcggt
ctgctgctgttcacgacctcgggcgaactggctaaccggctgatgcacccgcgctacaac
atcatccgcgagtacgcggtacgggtgctgggggatttgaccgacgaagcccaggatcaa
ctggtggacggcatcgagctcgaagatggtccggcacgcttctcgaccctggaagacgca
ggtggggaaggggcgaaccgctggtatcacgtgaccttgtccgaggggcgtaaccgggaa
gtgcggcgtatgttcgaagcggtgggcgtgaccgtcagccgtctgatgcgggttcgctac
ggtcctctgatcatgcccagccgcctcaagcgtgggcaatggatggaactgcccgagcac
gatgtggcggcactctttcaggcagtcggtatgtcggtgccggggactggcaacaacgcc
ttccggcgcggcatgaccggggtgtataccgggaatgacaactcgtcccaaggtcgtccg
ccgcgtgggatgcgttaa
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