Oryzomicrobium terrae: OTERR_13320
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Entry
OTERR_13320 CDS
T06190
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
otr
Oryzomicrobium terrae
Pathway
otr00300
Lysine biosynthesis
otr01100
Metabolic pathways
otr01120
Microbial metabolism in diverse environments
otr01230
Biosynthesis of amino acids
Module
otr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OTERR_13320 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otr01002
]
OTERR_13320 (dapE)
Enzymes [BR:
otr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
OTERR_13320 (dapE)
Peptidases and inhibitors [BR:
otr01002
]
Metallo peptidases
Family M20
OTERR_13320 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QEL64808
UniProt:
A0A5C1E973
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Position
complement(1466897..1468072)
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AA seq
391 aa
AA seq
DB search
MSTSSPLPLNPDDPTTLLAEALFARPSVTPDDAGCMDLIAARLAPLGFAIEFINRGNTRN
LWARRGTARPLVVLAGHTDVVPTGPVERWTTPPFSPSRRDGKLYARGTADMKSSLAAFVV
AVEQFVAAHPDHPGSIAFLLTSDEEGDATDGTVAVVEALTQRGEQLDCCIIGEPTSVGTL
GDMIKNGRRGSLSGKLTVKGIQGHIAYPHLAKNPVHMVAPALAELAGVEWDAGNEYFPPT
TWQISNIHGGTGATNVIPGTVEVKFNFRFSTASTPEGLQARLVAVLARHGLAPADYDLDW
TLGAKPFLTGRGPLVDAAVSAIREVTGIDTEVSTTGGTSDGRFIAPICPQVVEVGPVNAT
SHKIDEHIDLAALPQLAAIYRSMLEKLLAHD
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagcacttccagccccctacccctcaaccccgacgatccgaccaccctgttggcggaa
gccctgttcgcccggccctcggtcactccggacgacgccggctgcatggacctgatcgcc
gcgcgcctggcgcccctgggctttgccatcgaattcatcaaccggggcaacacccgcaac
ctgtgggcccggcgcggcaccgcccggcccctggtggtgctggccggccacaccgacgtg
gtgcccaccggcccggtggagcgctggaccaccccgcccttttcccccagccgccgcgac
ggcaagctctacgcccggggcaccgccgacatgaagtcgtccctggccgccttcgtcgtc
gccgtggagcaattcgtcgccgcccaccccgaccacccgggctccatcgccttcctgctc
acctccgatgaagagggcgacgccaccgacggcaccgtggccgtggtcgaggccctcacc
cagcgtggcgagcagctcgactgctgcatcattggcgagcccacctcggtcggcaccctg
ggcgacatgatcaaaaacggccggcgcggctccctttccggcaagctcaccgtcaagggc
atccagggccacatcgcctacccgcacctggccaagaacccggtgcacatggtggccccg
gccctggccgagctggccggggtggaatgggatgcgggcaacgagtacttcccccccacc
acctggcagatttccaacatccacggcggcaccggcgccaccaacgtgatcccgggcacc
gtggaggtgaagttcaacttccgcttctctaccgccagcaccccggaagggctgcaagcg
cggctggtggccgtgctcgccaggcacggcctggcccccgccgactacgacctggactgg
accctgggcgccaagcccttcctcaccggccgcggccccctggtggacgcggcggtgagc
gccatccgcgaggtcaccggcatcgacaccgaggtgtccaccaccggcggcacctccgac
ggccgcttcatcgccccgatctgcccccaggtggtggaagtgggcccggtgaacgccacc
agccacaagatcgacgaacacatcgacctggccgccctgccccaactggccgccatctac
cgctccatgctcgaaaagctccttgcccatgattga
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