Oryzomicrobium terrae: OTERR_13890
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Entry
OTERR_13890 CDS
T06190
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
otr
Oryzomicrobium terrae
Pathway
otr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OTERR_13890 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otr03400
]
OTERR_13890 (alkA)
Enzymes [BR:
otr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
OTERR_13890 (alkA)
DNA repair and recombination proteins [BR:
otr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OTERR_13890 (alkA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
QEL64865
UniProt:
A0A5C1E8A8
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All DBs
Position
1536127..1536717
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AA seq
196 aa
AA seq
DB search
MAELVRRYAGFTLVSRGDAFTTLARAIVGQQISVKAADAVWARFAARLEREGEMRSGRTG
PTPERLLAIGAPGLAGCGLSARKTDYLLDLARHFAEGLLHPGRWLTMDDDAVIAELTAVR
GIGRWTAEMFLIFNLLRPDVYPLQDLGLVKAIRLHYFAGEDVPLPALAAFGERWRPWRTV
ATWYLWRSLDPVPVTY
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggccgagctggtgcgccgctacgcgggctttaccctggtgtcccggggcgatgccttt
accaccctggcccgggccatcgtcggccagcagatctcagtcaaggccgccgatgcggtg
tgggcccgctttgccgcccggctggagcgcgagggcgagatgcgctccggtcggacggga
ccgacccccgagcggctgctggccatcggggcgccggggctggccggctgcggactgtcg
gcacgcaagaccgactacctgctcgacctggcccggcattttgccgaggggctgctccac
cccgggcgttggctgacgatggacgacgacgcggtgatcgccgaactgaccgcggtgcgc
ggcatcggccggtggacggcggagatgttcctcatcttcaacctgctgcgcccggacgta
tatccgctccaggacctgggcctggtcaaagccatccgcctgcactacttcgccggcgag
gacgtgcccctgccggccctggcggccttcggcgaacgctggcgcccctggcgcacggtg
gccacctggtacctgtggcgcagcctcgatccggtgccggtgacctattga
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