Oryzomicrobium terrae: OTERR_14470
Help
Entry
OTERR_14470 CDS
T06190
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
otr
Oryzomicrobium terrae
Pathway
otr00020
Citrate cycle (TCA cycle)
otr00190
Oxidative phosphorylation
otr00650
Butanoate metabolism
otr00720
Other carbon fixation pathways
otr01100
Metabolic pathways
otr01110
Biosynthesis of secondary metabolites
otr01120
Microbial metabolism in diverse environments
otr01200
Carbon metabolism
Module
otr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
otr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
otr_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OTERR_14470 (sdhB)
00650 Butanoate metabolism
OTERR_14470 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
OTERR_14470 (sdhB)
00720 Other carbon fixation pathways
OTERR_14470 (sdhB)
Enzymes [BR:
otr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
OTERR_14470 (sdhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_9
Fer4_7
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
QEL64923
UniProt:
A0A5C1E7S5
LinkDB
All DBs
Position
1597108..1597812
Genome browser
AA seq
234 aa
AA seq
DB search
MATVKFSIYRYDPDKDDKPYMQDISVELDSTDRKLLDAMVKLKALDDTLAFRRSCREGVC
GSDAMNINGKNGLACLTDIDSLAQPIVLRPLPGLPVVRDLIVDMTQFFKQYHSIKPYLIN
NDPAPERERLQSPEDREELNGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLAD
TRDQATNERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKDMMVQRMV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgtgaagttttctatctaccgctacgatccggacaaggacgacaagccgtac
atgcaggacatttcggtggaactggattccaccgatcgcaagctcctggatgccatggtc
aagctgaaggccctggacgataccctggctttccgtcgctcctgccgtgaaggtgtgtgc
ggttccgacgccatgaacatcaatggcaagaacggcctggcctgtctgaccgatatcgac
agcctggcccagccgatcgtgctgcggccgctgccgggtctgccggtggttcgcgatctg
atcgtggacatgacgcagttcttcaagcaataccactcgatcaagccctatctgatcaac
aacgatccggctccggagcgcgagcggctgcaatccccggaagaccgggaagaactgaac
gggctgtatgagtgcatcctgtgcgcctgctgctccacgtcctgcccgtcgttctggtgg
aacccggacaagttcgtcggccctgccggtctgttggcggcctaccgcttcctggccgat
acccgcgaccaggcaaccaacgagcgtctcgacaatcttgaagacccgtaccgtctgttc
cgctgccacaccatcatgaactgcgtcgatgtctgcccgaagggtctcaacccgaccaag
gccatcggcaagatcaaggacatgatggttcagcggatggtctga
DBGET
integrated database retrieval system