Oryzomicrobium terrae: OTERR_17940
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Entry
OTERR_17940 CDS
T06190
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
otr
Oryzomicrobium terrae
Pathway
otr00300
Lysine biosynthesis
otr00470
D-Amino acid metabolism
otr01100
Metabolic pathways
otr01110
Biosynthesis of secondary metabolites
otr01120
Microbial metabolism in diverse environments
otr01230
Biosynthesis of amino acids
Module
otr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OTERR_17940 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OTERR_17940 (lysA)
Enzymes [BR:
otr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
OTERR_17940 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QEL65270
UniProt:
A0A5C1E8S6
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Position
2008082..2009332
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AA seq
416 aa
AA seq
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MNPFTPATIAPLAQQFGTPLWIYDADTITRQIAALRLFDVVRFAQKANSNTHILRLMKRQ
GAVVDSVSLGEIERALAGGFTPGLHNGHADIVFTADLLDRATLARVVELNIPVNCGSMDM
LDQLGAVNSGHPVWLRINPGFGHGHSKKTNTGGEHSKHGIWHSDLVRACEKIKSNGLALQ
GLHMHIGSGVDYAHLQEVCGAMLKLVEVVNAQGLDLHAISAGGGLSVPYQAGEPTIDTAH
YFSLWDAARHAVERLLEHPVKLEIEPGRYLMAESGVLVTEVRATKQQGANHFVMVDAGFS
DLARPALYGAYHGMELIHSDGTAVNGLQFDTVVAGPLCESGDVFTQGDGGVVLHRSLPQA
QVGDLLVLHDTGAYGASMSSNYNARPLIAEVLMENGEPRLIRRRQTVAELLALEAV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaacccttttactcccgctaccatcgctcctttggcccagcagttcggtaccccgctg
tggatctatgatgccgacaccattacgcgccagattgccgctctgcggttgtttgacgta
gtgcgtttcgctcagaaagccaactccaatacacacatccttcgcctcatgaagcgacag
ggcgcagtggtggactcggtgtctttgggtgaaatcgaacgcgcgttggctggtggtttt
acgccgggcttgcacaacgggcacgcagacatcgtgttcacggccgatctgctggaccgc
gctacgcttgcgcgcgtggtggaactcaatattcccgtgaactgcggctccatggacatg
ctggaccaattgggtgcggtcaactcagggcacccggtgtggctacgcatcaacccaggt
ttcgggcatggccattccaagaaaacaaataccggtggcgagcatagcaagcatggcatc
tggcatagcgacctagtacgcgcctgcgaaaagatcaagtccaacggcctggccttgcag
ggcctgcacatgcacatcggctcgggcgtggactacgcgcacttgcaggaagtgtgcggt
gccatgctgaagctggtagaggtagtgaatgcgcagggtttggacctgcacgccatctcc
gcgggcggcggtctgtccgttccctaccaggccggtgaacccacgattgatacggcgcac
tacttttcattatgggatgcagcgcgccatgccgtggaacggctgctggagcacccagtg
aaactggaaatagaaccgggccgctatttaatggccgagtccggcgtgctggtcaccgag
gtacgcgccacgaagcaacagggcgccaaccattttgtgatggtggacgccggcttcagt
gatctggctcgcccggccctatacggcgcctaccacggcatggagttgatccactctgat
ggcacagcggttaatggcctgcagtttgacacggtggttgccggacctctgtgcgagtcg
ggagatgtgtttacgcagggagacggtggcgtggtgttgcaccgctccttgccgcaggcg
caggtgggagatctgctggtgttgcacgacaccggtgcgtatggcgcctccatgtcatcg
aactacaacgcgcgcccgctgattgccgaagtgctgatggaaaatggtgagccccggctt
attcgacgaaggcagacggtggctgagctgctcgcgctggaggcggtgtaa
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