Oryzomicrobium terrae: OTERR_19800
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Entry
OTERR_19800 CDS
T06190
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
otr
Oryzomicrobium terrae
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otr03016
]
OTERR_19800 (ybbB)
Enzymes [BR:
otr01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
OTERR_19800 (ybbB)
Transfer RNA biogenesis [BR:
otr03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
OTERR_19800 (ybbB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_SelU
Rhodanese
AAA_25
FtsK_SpoIIIE
AAA_16
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QEL65456
UniProt:
A0A5C1E915
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All DBs
Position
2219875..2220945
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AA seq
356 aa
AA seq
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MKNGVATVAQLAEFDEIIDVRSPLEFAEDHIPGAINCPVLSNEQRAEVGTLYKQVSPFEA
KKLGAAYISANIAAHLRERFLDRPKHWKPLIVCWRGGMRSGAMVTVFRSIGWNAQQLHGG
YKAYRHLVVEALDELPPRFTWRVIAGATGSGKSRVLHHLAAAGAQVLDLEGLACHKGSVL
GVLPGEPQPAQKWFETRLWQTLSGFDAARPVYVEAESRKIGKLHLPEALITAIRGGACRV
VSATVPARVDFLLRDYDYFLTDPNWLIERLAGLKALRGGETIARWTALVQAGDFRALVEE
LLTGHYDPLYAASQDRNYTGLAASRDYAADDLSEAGIATLAAAILADDTRDAALTA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacggggttgccaccgtagcacagcttgcggaattcgacgaaatcatcgacgtc
cgctcccctctcgaattcgccgaggaccacatccccggggccatcaactgcccggtgctg
agcaacgagcagcgggccgaggtgggcaccctgtacaagcaggtgtcgcccttcgaggcc
aagaagctcggcgccgcctacatctcggccaacatcgccgcccacctgcgcgaacgcttc
ctcgaccggcccaagcactggaaacccctgatcgtctgctggcgcggcggcatgcgctcc
ggcgccatggtcaccgtattccgctccatcggctggaacgcccaacaactccacggcggt
tacaaggcctaccgccacctggtggtggaggccctggacgaactgccgccccgcttcacc
tggcgggtcatcgccggggccaccggcagcggcaagagccgggtactgcaccacctggcc
gccgccggcgcccaggtgctggatctggaagggctggcctgccacaagggctcggtgctc
ggcgtgctgcccggggaaccccagccggcgcagaagtggttcgagacccggctgtggcag
accctgagcggcttcgatgcggcccggccggtgtacgtggaggccgaatcgcgcaagatc
ggcaagctgcacctgcccgaagccctgattaccgccattcgcggcggcgcctgccgggtg
gtgtcggccacggtgccggcccgggtggacttcctgctgcgcgactacgactacttcctc
accgaccccaactggctgatcgagcgcctggccggactgaaggccctgcgcggcggcgag
accatcgcccgctggacggccctggtgcaggccggcgacttccgcgccctggtcgaggaa
ctgctcactggccactacgacccgctctacgccgcctcccaggaccgcaactacacgggc
ctggccgcctcccgggactacgccgccgacgacctgtcggaagccggcatcgccacgctg
gcggcggccatcctggcggacgacacccgggacgccgccctcaccgcctga
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