Oryzomicrobium terrae: OTERR_20580
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Entry
OTERR_20580 CDS
T06190
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
otr
Oryzomicrobium terrae
Pathway
otr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OTERR_20580 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otr03019
]
OTERR_20580 (orn)
03009 Ribosome biogenesis [BR:
otr03009
]
OTERR_20580 (orn)
Messenger RNA biogenesis [BR:
otr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OTERR_20580 (orn)
Ribosome biogenesis [BR:
otr03009
]
Eukaryotic type
Pre-60S particles
RNases
OTERR_20580 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QEL65534
UniProt:
A0A5C1EA65
LinkDB
All DBs
Position
complement(2317316..2317858)
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AA seq
180 aa
AA seq
DB search
MAQDPNHLVWLDMEMTGLEPDRDRILELAMVVTTSDLDVVAQSPVWAVHQPDAVLAGMDD
WNQKTHGESGLIARVKASTTDEATVEAQALAFMQQYVDKRVTPMCGNSIGQDRRFMARYM
PTLEAWFHYRNLDVSTVKELCRRWRPEVFAGLKKKGAHTALSDILESIDELRYYRTNFFK
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggaccccaaccacctcgtctggctggacatggagatgaccggcctggaaccg
gaccgggaccgcattctcgaactggccatggtggtgaccacctccgacctggacgtggtg
gcccagtcgccggtttgggcggtacatcaacccgatgcggtgctggccggcatggacgac
tggaaccagaagacccacggcgaatcgggcctgatcgcccgggtcaaggcctccaccacc
gacgaggccactgtcgaggcccaggccctggccttcatgcagcagtacgtggacaagcgg
gtgacgccgatgtgcggcaactccatcggccaggaccggcgcttcatggcccgctacatg
ccgaccctggaagcctggttccactaccgcaacctggacgtgtccaccgtcaaggagctg
tgccggcgctggcgccccgaggtgttcgccgggctgaagaagaagggcgcccacacggcc
ctttccgacatcctggagtccatcgacgagctgcgctactaccggaccaatttcttcaag
taa
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integrated database retrieval system
