Oryzomicrobium terrae: OTERR_21780
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Entry
OTERR_21780 CDS
T06190
Symbol
rfaD
Name
(GenBank) ADP-l-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
otr
Oryzomicrobium terrae
Pathway
otr00541
Biosynthesis of various nucleotide sugars
otr01100
Metabolic pathways
otr01250
Biosynthesis of nucleotide sugars
Module
otr_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OTERR_21780 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
otr01005
]
OTERR_21780 (rfaD)
Enzymes [BR:
otr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
OTERR_21780 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
otr01005
]
Core region
OTERR_21780 (rfaD)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
QEL65654
UniProt:
A0A5C1EAI3
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All DBs
Position
complement(2441813..2442808)
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AA seq
331 aa
AA seq
DB search
MYTIVTGAAGFVGANIVKALNERGVTNILAVDNLTKADKFKNLVDCEIADYLDKHEFIER
LQAGDFDGDVEAIFHEGACSDTMETDGRYMMENNYRYSTILLDWCQDQDVQFLYASSAAT
YGGSSVFREERQYEAPLNVYGYSKFLFDQVVRRRLPDAGSQIVGFRYFNVYGPRENHKGR
MASVAFHHFHQYRADQKVKLFEGSHGYGPGEQQRDFVYVGDVAKVNLWFLDHPNVSGIFN
LGSGRAQSFNDVAVASINGARALEGQAALSLDELRAAGKIEYVPFPEQLKGKYQAFTQAD
LTRLREAGYDAPFATVEEGVANYVKWLSSRV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccatcgtcaccggtgctgccgggttcgtcggcgccaatatcgtcaaggcgctc
aacgagcggggcgtcaccaatattctcgccgtcgacaacctgaccaaggccgacaagttc
aaaaacctggtggattgcgagatcgccgactacttggataagcatgagttcattgagcgg
ctccaagccggtgatttcgacggcgacgtggaggcaatcttccacgagggcgcctgctcc
gacaccatggagaccgatgggcgctacatgatggagaacaattaccgttactccaccatc
ctgctcgactggtgccaggatcaggacgtccagttcctctatgcttccagcgccgccacc
tacggcggcagcagcgtattccgcgaggagcgccagtacgaggcgccgctcaacgtttac
ggttattccaaattcctgttcgaccaggtcgtccgccgccgtctgcccgatgcaggttcc
cagatcgttggtttccgctacttcaacgtgtacgggccccgcgagaatcataaggggcgc
atggcctcggtggccttccatcactttcatcagtaccgggcagaccagaaggtcaagctg
ttcgagggctcccacggctacggtccgggtgagcagcagcgcgatttcgtttatgtcggc
gacgtggccaaggtgaacctgtggttcctcgaccatccgaacgtgtcgggcatcttcaac
ctcggctccggccgcgcccagtcgttcaacgatgtggcggtggcctcgatcaacggcgct
cgagccctggagggccaagcggccctgtctctggacgaactccgtgccgccggaaagatc
gaatatgttcccttcccggaacaactgaagggcaaataccaagcctttacccaggcggat
ctgacccgtctgcgcgaggcgggctacgatgcccccttcgctaccgtcgaggaaggtgtg
gccaattacgtgaaatggttgagcagtcgtgtataa
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