Oryzomicrobium terrae: OTERR_21840
Help
Entry
OTERR_21840 CDS
T06190
Symbol
rpsA
Name
(GenBank) small subunit ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
otr
Oryzomicrobium terrae
Pathway
otr03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
OTERR_21840 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
otr03011
]
OTERR_21840 (rpsA)
Ribosome [BR:
otr03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
OTERR_21840 (rpsA)
Bacteria
OTERR_21840 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Amidohydro_1
Motif
Other DBs
NCBI-ProteinID:
QEL65660
UniProt:
A0A5C1E9T9
LinkDB
All DBs
Position
complement(2447163..2448857)
Genome browser
AA seq
564 aa
AA seq
DB search
MSETLTMESFAQLFEESLARQEMRQGEVITAEVVRVDQNFVVVNAGLKSESYVPVVEFLN
DQGELEVAPGDFVQVAIEQLEDGFGETRLSRDRAKRIAAWNKLDAALNDGTLVAGTITGK
VKGGLTVMVNGVRAFLPGSLVDMRPVKDTTPYEGKTLDFKVIKLDRKRNNVVLSRRAVLE
ETMGEERQKLLENLKEGTVVKGIVKNITDYGAFVDLGGIDGLLHITDLAWRRVRHPSEVL
TVGDEVTAKVLKFDQEKNRVSLGLKQLGEDPWVGISRRYPSGTRLFGKVTNITDYGAFVE
IESGIEGLVHVSEMDWTNKNIHPTKVVQLGDEVEVMILEIDEDRRRISLGMKQCMANPWD
DFAINFKKGDKVKGAIKSITDFGVFIGLPGGIDGLVHLSDLSWTTTGEDAIRSFKKGDEV
EAMVLAIDVEKERISLGVKQLEGDPFTSFIATHEKNSVVKGTVKSVDAKGAVVALSEEVE
GYLRASEFSRDRIEDLSSVLKVGEEVDAMIVNVDRKSRQINLSIKAKDNAEQHEALQKIA
SEGSGAAGTTNLGALLKAKLNQQG
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaccctcaccatggaaagctttgcccagctcttcgaagagagccttgcccgt
caggaaatgcgtcagggcgaggtcatcaccgccgaagtggtgcgcgtcgaccagaacttc
gtggtcgttaacgccggactgaagtccgaaagctatgttcctgtcgtcgaattcctcaac
gaccagggcgaactggaagttgcccctggcgatttcgtgcaggttgccatcgaacagctc
gaagacggcttcggtgaaacccgcctctcccgcgatcgcgccaagcgcatcgccgcatgg
aataagctggacgccgccctcaatgacggcaccctggtggctggtaccatcactggcaag
gtcaagggcggcctgaccgtcatggtcaacggcgtgcgcgccttcctgcccggctccctg
gtggacatgcgtccggtcaaggacaccacgccgtacgaaggcaagaccctcgacttcaag
gtcatcaagctcgaccgcaagcgcaacaacgtggtgctgtcccgccgtgccgtgctcgaa
gagaccatgggcgaagagcgccagaagctccttgagaatctcaaggaaggcaccgtcgtc
aagggcatcgtcaagaacatcaccgactacggcgcgttcgtggatctgggcggcatcgat
ggcctgctgcacatcaccgatctggcctggcgtcgtgtccgtcacccgtccgaagttctc
accgtgggcgacgaagttaccgccaaggtgctcaagttcgaccaggagaagaaccgtgtc
tccctgggcctgaagcaactgggcgaggatccgtgggtgggcatctcccgtcgctacccg
tccggtacccgtctgttcggcaaggtcacgaacatcaccgactacggcgcgttcgtggaa
atcgaatccggtatcgaaggcctggtgcacgtctccgaaatggactggaccaacaagaac
atccacccgaccaaggtcgtccagctgggcgacgaggtcgaagtgatgatcctcgaaatc
gacgaagaccgccgccgtatctccctgggtatgaagcagtgcatggccaacccctgggat
gatttcgccatcaatttcaagaagggcgacaaggtcaagggcgccatcaagtcgatcacc
gactttggcgtgttcatcggtctgcctggcggtatcgacggcctggtgcacctctccgac
ctgtcctggaccaccaccggcgaagacgcgatccgctccttcaagaagggcgacgaagtg
gaagccatggtgctggccatcgacgtggagaaggagcgtatctccctgggcgtcaagcag
ctcgaaggcgatccgttcacctccttcatcgccacccacgagaagaattccgtggtcaag
ggcaccgtgaagagcgtggatgccaagggcgccgtggttgccctgtccgaggaagtggaa
ggctacctgcgtgcttccgaattctcccgcgatcgcatcgaggatctgtcctccgtgctg
aaggtgggcgaagaggtggacgccatgatcgtgaacgtggatcgcaagtcccgtcagatc
aacctttccatcaaggccaaggataacgccgaacaacacgaagcgctgcagaagattgct
tccgaaggttccggcgcggcaggcaccaccaacctgggtgccctgctcaaggccaagctg
aaccagcaaggctga
DBGET
integrated database retrieval system
