Oryzomicrobium terrae: OTERR_21900
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Entry
OTERR_21900 CDS
T06190
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
otr
Oryzomicrobium terrae
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otr03032
]
OTERR_21900 (gyrA)
03400 DNA repair and recombination proteins [BR:
otr03400
]
OTERR_21900 (gyrA)
Enzymes [BR:
otr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OTERR_21900 (gyrA)
DNA replication proteins [BR:
otr03032
]
Prokaryotic type
DNA Topoisomerases
OTERR_21900 (gyrA)
DNA repair and recombination proteins [BR:
otr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OTERR_21900 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QEL65666
UniProt:
A0A5C1E9L8
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Position
complement(2455358..2457979)
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AA seq
873 aa
AA seq
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MEQFAKETLPVSLEDEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELGNDWN
KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEVRMARIGHELLADIDKETVDFGPNYDGSEQEPLILPAKIPNLLINGSSGIAVGMAT
NIPPHNLSEVVAGCLALLENPALTVDDLIEYIPAPDFPTAGIIYGINGVREGYHTGRGRV
VMRAKTHVEDLEKGGKQAIIVDELPYQVNKKTLLEKIAELVNDKKIEGISHIQDESDKSG
MRVVIELKRGEMPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQMLECFLAHRRE
VVTRRTVFELRKARERGHVLEGLAVALSNVDEIIALIKAAPTPADARRALLERTWRSPVV
EEMLARSVADASRPEGLAPEFGLSGQGYRLSEAQAQAILELRLQRLTGLEQDKIVGEYRE
VMATIADLLDILAKPARITAIIVEELTAIRAQFGDGAKDKRRSEIVTYAQDLGIEDLITP
QDMVVTLSHTGYIKSQPLTDYRAQRRGGRGKQAASIKDDDFVDHLFVANTHDYILCFSNR
GRVYWLKVYEVPQGSRTSRGKPIVNMFPMEEGEKINAILPVKEFAEDRYIFMCTVQGTVK
KTPLSDFSNPRKAGIIAVALDEGDYLIGAELTNGQNDIMLVSDGGKAVWFDEEDVRPMGR
NARGVRGMKLQEGQRVISLLVAENETQTVLIATENGYGKRTALSEFRHSGRGTQGVIAIQ
QSERNGIVVGAKLVVESDEVMLITTGGVLIRTRVAEIRELGRATQGVTLISLDQGEKLAG
LEKVVETEGLNTGEGDDLEGEVDTDADGEVSEE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggaacaattcgccaaggaaaccctaccggtcagtctcgaagacgagatgcggcgctcc
tacctcgattacgccatgagcgtgatcgtgggacgcgccctgccggatgtgcgtgatggc
ctcaagcccgtgcatcgccgtgtgctgttcgccatgcacgagctgggcaacgactggaac
aaggcttacaagaagtctgcccgcgtggttggcgacgtgatcggtaagtaccaccctcac
ggcgacacggcggtgtacgacaccatcgtgcgcatggcccaggacttttccctgcgctac
atgctcgtcgatggccagggcaacttcggctcggtagacggcgacaacgccgccgccatg
cgttacaccgaagtgcgcatggcccgtatcggccacgaactactcgccgacatcgacaag
gaaaccgtcgacttcggccccaactacgacggttccgagcaggaacccctgatcctgccg
gccaagattcccaacctgctgatcaacggctcgtccggcattgcggtgggcatggccacc
aacatcccgccccacaacctgtccgaggtggtggccggctgcctggcgctgctggaaaac
cccgcgctgacggtcgatgacctgatcgagtacattccggcccccgatttccccaccgcc
ggcatcatctacggcatcaacggggtgcgcgagggttaccacaccggccgtggccgggtg
gtgatgcgcgccaagacccacgttgaggatctggaaaagggcggcaagcaggcgatcatc
gtcgacgagctgccctatcaggtgaacaagaagaccctgctcgaaaaaattgccgagctg
gtcaacgacaagaagatcgaaggtatctcccatattcaggacgagtccgacaagtccggc
atgcgggtggtgatcgagctcaagcgtggcgaaatgcccgaggtggtgctcaacaacctg
tacaagcagactcagttgcaggacaccttcggcatgaacatggtcgccctggtggacggc
cagccgcgcctgctcaacctgaagcaaatgctggagtgcttcctcgcccaccggcgcgag
gtggtgacccgccgcaccgtattcgaactgcgcaaggcccgggaacggggtcacgtgctc
gaaggcttggcggtggccctgtccaacgtggacgagatcatcgccctgatcaaggcggcg
ccgacaccggcggatgcccgtcgcgccctgctggagcgcacctggcgcagcccggtggtg
gaagagatgctggcccgctcggtggccgatgcctcccggcctgaaggactggcgcccgaa
ttcggtctgtccggtcagggctaccggctgtccgaagcccaggcccaggccatcctggaa
ctgcgcctgcaacgcctgaccggcctggagcaggacaagatcgttggcgagtaccgggag
gtgatggcgaccatcgccgacctgctcgacatcctggccaagccggcgcgcatcaccgcc
atcatcgtcgaggaactgaccgccatccgcgcccagttcggcgacggggccaaggacaag
cgccgctccgagatcgtcacctacgcccaggacctgggtatcgaggatctgattacgccc
caggacatggtcgtgaccctgtcccataccggctacatcaagtcccagccgctcactgac
taccgtgcccagcgccgcggcggtcgaggcaagcaggcggcctcgatcaaggacgacgat
ttcgtcgatcacctgttcgtcgccaacacccacgactacatcctgtgcttctccaaccgg
ggccgggtgtactggctcaaggtctatgaagtgccccagggcagccgcaccagccgtggc
aagccgatcgtgaacatgttcccgatggaagagggcgagaagatcaacgccatcctgccg
gtgaaggagttcgccgaggatcgctacatcttcatgtgcaccgtccagggcaccgtcaag
aagacccccttgtccgacttctccaacccgcgcaaggccggcatcatcgccgtggccctg
gatgaaggcgactacctgatcggtgccgaactgaccaacggccagaacgacatcatgctg
gtgtccgatggcggcaaggcggtgtggttcgacgaggaggatgtccgtcccatgggccgc
aacgcccgcggcgtgcgcggcatgaaactccaggaaggccagcgggtcatctccttgctg
gtggccgagaacgaaacccagaccgtactgatcgccaccgaaaacggctatggcaagcgt
accgccctgtccgagttccgccactccggtcgcggcacccagggcgtgattgccatccag
cagtccgagcgcaacggcatcgtggtcggtgccaagctggtggtggagtctgacgaggtg
atgctgatcaccaccggtggtgtgctgattcgcacccgggtggccgaaatccgtgaattg
ggccgcgccactcaaggcgtaaccctgatttccctggatcagggcgaaaaactggccggc
ctggaaaaggttgtggaaaccgaaggtttgaacacgggcgaaggcgacgacctggagggt
gaggtcgacactgacgctgatggcgaggtgagcgaagaatga
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