Oryzomicrobium terrae: OTERR_23560
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Entry
OTERR_23560 CDS
T06190
Symbol
dctD
Name
(GenBank) two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
otr
Oryzomicrobium terrae
Pathway
otr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OTERR_23560 (dctD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
otr02022
]
OTERR_23560 (dctD)
Two-component system [BR:
otr02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
OTERR_23560 (dctD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
TIP49
HTH_30
AAA
FleQ
AAA_2
AAA_3
Motif
Other DBs
NCBI-ProteinID:
QEL65832
UniProt:
A0A5C1EA87
LinkDB
All DBs
Position
complement(2663145..2664566)
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AA seq
473 aa
AA seq
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MSALSVHADPAAPLSVFLVEDDPVVRHGSEQALALADLPVQSFADAESALNALVVAPSAR
SVGVVISDVRLPGRDGLSLMTELRQRDPDLPVILVTGHGDVAMAVEAMREGAYDFIEKPF
SSDRLVDSARRALDKRALILENRRLKERLADQDNHPLAGLIGQSPAMQQVRRLLEAVAPT
DVDVLINGETGAGKEVVARALHAASGRKGPFVALNCGALPESVFESEIFGHEAGAFTGAG
KRRIGKIEFAQGGTLFLDEIESMPLALQVKLLRVLQERVVERLGGNTLFPVDCRVVAASK
ADLKAESDAGRFRADLYYRLNVVTLDLAPLRERREDIPLLMAHFCRQAAQRYGRPVPAPS
PEQLARWQAYDWPGNVRELKNIADRVVLGLETPLPAAAAPHAMTAAAAPALPPAAPGESL
AARLDAVEKACIEAALKECGGQVARAAERLQLPKKTLYDKLHRHGIDPERFRS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccctatccgtgcatgccgaccctgccgcccctctgtcggtgtttctcgtcgag
gacgacccggtggtgcgccacgggtccgaacaggccttggccctggccgatctgccggtg
caaagcttcgccgatgccgaatcggccctgaacgccctggtcgtcgccccctcggcgcgc
agcgtcggggtggtgatcagcgacgtgcgcctgcccggtcgcgacggcctgtcgctgatg
accgagctgcgccagcgcgacccggacctgccggtgatcctggtcaccggccatggcgac
gtggccatggcggtggaggcgatgcgcgagggcgcctacgacttcatcgagaagcccttt
tcctccgaccgcctggtggattcggcccgccgcgccctggacaagcgtgccctgatcctg
gaaaaccggcgcctgaaggagcgcctggccgaccaggacaaccatcccctggccggcctg
atcggccagtccccggccatgcagcaggtgcgccgcttgctcgaagcggtggcccccacc
gacgtggacgtgctgatcaacggcgaaactggcgccggcaaggaggtggtggcccgggcc
ctgcacgccgccagcgggcgcaaggggccgttcgtggcgctcaactgcggcgccctgccc
gaatcggtgttcgagagcgagatcttcggtcacgaggccggcgccttcaccggggcgggc
aagcggcgcatcggcaagatcgagttcgcccagggcggcaccctgttcctcgacgagatc
gaatccatgcccctggcgcttcaggtcaagctgctgcgggtgctccaggagcgggtggtg
gaacgcctcggcggcaacaccctgttcccggtggattgccgggtggtggccgcctccaag
gccgacctcaaggccgagagcgacgccggacgcttccgcgccgacctgtattaccggctc
aacgtggtgaccctcgacctggcgcccctgcgcgagcggcgcgaggacattcccctgctg
atggcccacttctgccgccaggcggcccagcgctacggtcgtccggtgccggcgcccagc
cccgagcagctggcccgctggcaggcctacgactggccgggcaacgtgcgcgaactgaag
aacatcgccgaccgggtggtgctcggcctggaaacacccctgccggccgccgccgcgccc
cacgccatgaccgccgcggccgctccggccctgcccccggcggcccctggcgagagcctg
gcggcgcgcctggacgcggtggaaaaggcctgcatcgaggccgccctcaaggagtgcggc
ggccaggtggcccgggccgccgagcgcttgcagttgccgaagaagaccctctacgacaaa
ctccaccgccacggcatcgatccggaacgcttccgttcctga
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