Oryzomicrobium terrae: OTERR_25520
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Entry
OTERR_25520 CDS
T06190
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
otr
Oryzomicrobium terrae
Pathway
otr00300
Lysine biosynthesis
otr00470
D-Amino acid metabolism
otr01100
Metabolic pathways
otr01110
Biosynthesis of secondary metabolites
otr01120
Microbial metabolism in diverse environments
otr01230
Biosynthesis of amino acids
Module
otr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OTERR_25520 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OTERR_25520 (lysA)
Enzymes [BR:
otr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
OTERR_25520 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QEL66028
UniProt:
A0A5C1ECM2
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All DBs
Position
complement(2877589..2878824)
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AA seq
411 aa
AA seq
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MNDNILDNWNSISCASQELGDAFYFFDEARFCSNYHEMLGEFARFYPRVEIAYSYKTNYT
PYICKLVDRLGGRAEVVSEMELELARRVGVDFGKVIYNGPCKSYSSLDAAARAGVLINLD
NLEDIKKLEIICAQTEMPTVQVAFRCNFGEIDGQSSRFGFDVGGEEFEKALKIISKNKRL
DLVGLHCHYPNRQPSTYKTRALKVVALANRIFSNPPKFINLGGGFMSHMPADLANKMGVV
PASFCDYAQIIGNELIRHYGDKDDLPTLIVEPGTALVADTLNFVCQVTSTRYVGERLIAV
VSGSIFNISPTARSSNLPVTLVCNPQNLRDSELVFDVAGYTCIESDFLSRNVRGNPMVGD
FLVYSNVGSYSVVMKPPFILPSVPIVMCGKNGLEVIKQGEDFDYIFEKFKF
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataatattcttgataattggaatagtatttcttgcgctagccaagagctcggt
gatgctttttatttttttgacgaggcgcgattttgtagcaactatcacgaaatgctcggt
gagttcgcaagattctatcctagggttgaaatagcttactcatataagacaaactacact
ccgtatatttgtaagctcgtagatagattgggtgggcgcgccgaagttgtctctgagatg
gagcttgaattggcacgtagagtgggtgttgattttggcaaagtaatttacaacggtccg
tgtaaatcatattcatctcttgatgcggcagctcgtgcaggtgtcttaattaatctagat
aatcttgaggatattaagaagcttgagataatttgcgcccagaccgaaatgccaacggtt
caggttgcttttcgctgtaattttggtgaaattgatgggcagtcctcacgatttggattt
gatgttggaggggaagagttcgagaaagcgttgaaaataatttcaaagaataaaaggctt
gaccttgtaggattgcattgccactaccccaatcgccagccatctacatacaaaactcgc
gcattaaaagtagttgctttggccaatagaatattttctaatccgcctaagtttataaat
ttgggtggtggttttatgagtcatatgccagccgacttggctaacaagatgggtgttgtt
ccggcctcattttgtgactatgcacaaattattggtaatgagcttattcgtcattacgga
gataaggatgatttgccaactctgattgtagagccaggtactgctctggttgcagataca
ttaaattttgtatgtcaagttacatctactcgatatgtcggcgaaagacttattgctgtt
gtttccggcagtatattcaacataagcccaacggcaaggtcgtcaaatttaccggttacg
cttgtttgtaatccacaaaacttgcgcgatagtgagctggtattcgatgtggctggttat
acatgtatcgagagtgattttcttagcaggaatgttcgcggtaatccgatggtaggtgat
tttttggtctattcaaatgtaggctcttactctgtggtaatgaagcctccgtttatattg
ccaagtgtgcctattgttatgtgcggaaaaaatggcctggaggttataaagcagggtgag
gactttgattatatttttgaaaaatttaagttttaa
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