KEGG   Oryzomicrobium terrae: OTERR_25680
Entry
OTERR_25680       CDS       T06190                                 
Symbol
lpd
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
otr  Oryzomicrobium terrae
Pathway
otr00010  Glycolysis / Gluconeogenesis
otr00020  Citrate cycle (TCA cycle)
otr00260  Glycine, serine and threonine metabolism
otr00280  Valine, leucine and isoleucine degradation
otr00310  Lysine degradation
otr00380  Tryptophan metabolism
otr00620  Pyruvate metabolism
otr00630  Glyoxylate and dicarboxylate metabolism
otr00640  Propanoate metabolism
otr00670  One carbon pool by folate
otr00785  Lipoic acid metabolism
otr01100  Metabolic pathways
otr01110  Biosynthesis of secondary metabolites
otr01120  Microbial metabolism in diverse environments
otr01200  Carbon metabolism
otr01210  2-Oxocarboxylic acid metabolism
otr01240  Biosynthesis of cofactors
Module
otr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
otr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
otr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:otr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    OTERR_25680 (lpd)
   00020 Citrate cycle (TCA cycle)
    OTERR_25680 (lpd)
   00620 Pyruvate metabolism
    OTERR_25680 (lpd)
   00630 Glyoxylate and dicarboxylate metabolism
    OTERR_25680 (lpd)
   00640 Propanoate metabolism
    OTERR_25680 (lpd)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    OTERR_25680 (lpd)
   00280 Valine, leucine and isoleucine degradation
    OTERR_25680 (lpd)
   00310 Lysine degradation
    OTERR_25680 (lpd)
   00380 Tryptophan metabolism
    OTERR_25680 (lpd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    OTERR_25680 (lpd)
   00670 One carbon pool by folate
    OTERR_25680 (lpd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otr04147]
    OTERR_25680 (lpd)
Enzymes [BR:otr01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     OTERR_25680 (lpd)
Exosome [BR:otr04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   OTERR_25680 (lpd)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored Pyr_redox_3 GIDA BSH_YknX NAD_binding_8 AlaDh_PNT_C FAD_binding_3 Thi4 FAD_binding_2 GCV_H DAO BSH_CzcB BSH_CusB BSH_Fcp1 HI0933_like DUF7252 BSH_RND
Other DBs
NCBI-ProteinID: QEL66044
UniProt: A0A5C1EBH9
LinkDB
Position
2896376..2898166
AA seq 596 aa
MSQLVEVKVPDIGDFKDVPVIEVFVKAGDTVNAEDALVSLESDKATMDVPSSATGVVKEV
KVKVGDKVSEGSLILVLEASAAAVTPAPAPTAAVPTPAPAAPAAPTAAPQAAGAYTGPVD
VECDMLVLGAGPGGYSAAFRAADLGMKTVIVERYASLGGVCLNVGCIPSKALLHVTAVMD
ETAHFADLGVTYAQPQVDIDKLRAHKAKVVGKLTGGLAGMAKARKVEVVRGYGSFLDAHH
VEVEVTDGAGQDKTGAKQVVRFKQCIIAAGSAAVHLPFIPRDPRIVDSTGALELRFVPEK
MLVIGGGIIGLEMATVYSTLGARVDVVEMLDGLMQGPDRDAVKVWEKQNLHRFDQVMLKT
KTVAVEAKDDGLWVTFEGDKAPAGPQRYDLILQAAGRSPNGKKIGAEKAGVVVGERGFIP
VDAQMRTNVPHIFAIGDIVGNPMLAHKAVHEAHVAAEAAAGQKVAFDAQVIPGVAYTHPE
VAWVGVGEDDAKKAGRKVEVAKFPWAASGRAIANGADYGFTKLVFDAESHRVIGGTIVGP
SAGDMIGEVALAIEMGCDAVDIGKTIHPHPTLGESIGMAAEVAHGSCTDLPPMKKR
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgagccaactggttgaagtaaaggtcccggacatcggcgacttcaaggacgtgccggtc
atcgaggtgttcgtcaaagccggcgacaccgtcaacgccgaggacgccctggtcagcctg
gaatccgacaaggccaccatggacgtgccctcctcggccaccggcgtggtcaaggaggtc
aaggtcaaggtcggcgataaggtcagcgaaggcagcctgattctggtgctggaagccagc
gctgccgcagtgacaccggcgcctgcgccgacggcggccgtgccgaccccggcacccgcc
gccccggccgctcccacagccgccccccaggccgcaggcgcctacacgggcccggtggat
gtggaatgcgacatgctggtgctgggcgccggcccgggcggctactccgccgccttccgc
gccgccgacctgggcatgaagaccgtcatcgtcgagcgctacgcctccctgggcggcgtc
tgcctcaacgtcggctgcatcccgtccaaggccctgctccacgtcaccgcggtgatggac
gaaaccgcccatttcgccgacctgggcgtgacctacgcccagccccaggtggacatcgac
aagctacgcgcccacaaggccaaggtggtgggcaagctcaccggcggcctggccggcatg
gccaaggcgcgcaaggtggaggtggtgcgcggctacggcagcttcctcgacgcccaccac
gtggaagtggaagtcaccgacggcgccggccaggacaagaccggcgccaagcaggtggtg
cgcttcaagcagtgcatcatcgccgccggcagcgccgcggtgcacctgcccttcattccc
cgcgacccgcgcatcgtcgattccaccggcgccctggaactgcgtttcgtgcccgagaag
atgctggtcatcggcggcggcatcatcggcctggaaatggccacggtctattccaccctg
ggcgcccgcgtcgatgtggtggaaatgctcgacggcctgatgcagggcccggaccgggac
gcggtcaaggtctgggaaaaacagaacctgcaccgtttcgaccaggtcatgctcaagacc
aagaccgtcgctgtcgaagccaaggacgacggcctgtgggtcaccttcgaaggcgacaag
gcccccgccgggccgcagcgctacgacctgatcctgcaggccgccgggcgcagccccaac
ggcaagaagatcggtgccgagaaggccggcgtggtcgtcggtgagcgcggcttcatcccg
gtggacgcccagatgcgcaccaacgtgccgcacatcttcgccattggcgacatcgtcggc
aacccgatgctggcccacaaggccgtgcatgaggcccacgtggccgccgaggctgccgcc
ggccagaaggtcgccttcgacgcccaggtcatccccggggtggcctacacccacccggaa
gtagcctgggtcggcgtcggcgaggacgacgccaagaaggccgggcgcaaggtcgaagtg
gccaagttcccctgggctgcctccggccgggccatcgccaacggcgccgactacggcttc
accaagctggtgttcgacgccgagtcgcaccgggtgatcggcggcaccatcgtcggcccc
tccgccggcgacatgatcggcgaagtggccctggccattgagatgggctgcgacgcggtg
gatatcggcaagacgatccatccgcacccgaccctgggcgaatcgatcggcatggcggcc
gaagtcgcccacggctcgtgcaccgacctgccgccgatgaagaagcgttaa

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