Oryzomicrobium terrae: OTERR_25760
Help
Entry
OTERR_25760 CDS
T06190
Symbol
hupB
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
otr
Oryzomicrobium terrae
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otr03032
]
OTERR_25760 (hupB)
03036 Chromosome and associated proteins [BR:
otr03036
]
OTERR_25760 (hupB)
03400 DNA repair and recombination proteins [BR:
otr03400
]
OTERR_25760 (hupB)
DNA replication proteins [BR:
otr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OTERR_25760 (hupB)
Chromosome and associated proteins [BR:
otr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OTERR_25760 (hupB)
DNA repair and recombination proteins [BR:
otr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OTERR_25760 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF979
HU-DNA_bdg
UBA_HYPK
Motif
Other DBs
NCBI-ProteinID:
QEL66052
UniProt:
A0A5C1EB01
LinkDB
All DBs
Position
2905723..2906013
Genome browser
AA seq
96 aa
AA seq
DB search
MNKNELIDAIAQEADVTKAAAGRVLDALTSTVVKAVAAGDSVTLVGFGSFKSSSRAAREG
KNPKTGEKIKIPAATVPKFSAGAGFKEAVNKPAKKK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgaactgatcgatgccatcgcccaggaagcggacgtcaccaaggccgcc
gctggccgcgtgctcgacgccctgacctccactgttgtgaaggctgttgccgctggcgac
tccgtcaccctggtcggcttcggcagcttcaagtccagcagccgggctgcccgcgaaggc
aagaacccgaagactggcgaaaagatcaagatcccggccgccaccgtgccgaagttctcc
gccggcgccggcttcaaggaagccgtgaacaagcccgccaagaagaagtaa
DBGET
integrated database retrieval system
