Oryzomicrobium terrae: OTERR_26550
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Entry
OTERR_26550 CDS
T06190
Symbol
fadB
Name
(GenBank) alpha-subunit of fatty acid oxidation complex
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
otr
Oryzomicrobium terrae
Pathway
otr00071
Fatty acid degradation
otr00280
Valine, leucine and isoleucine degradation
otr00310
Lysine degradation
otr00362
Benzoate degradation
otr00380
Tryptophan metabolism
otr00410
beta-Alanine metabolism
otr00640
Propanoate metabolism
otr00650
Butanoate metabolism
otr00907
Pinene, camphor and geraniol degradation
otr00930
Caprolactam degradation
otr01100
Metabolic pathways
otr01110
Biosynthesis of secondary metabolites
otr01120
Microbial metabolism in diverse environments
otr01200
Carbon metabolism
otr01212
Fatty acid metabolism
Module
otr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
OTERR_26550 (fadB)
00650 Butanoate metabolism
OTERR_26550 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
OTERR_26550 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
OTERR_26550 (fadB)
00310 Lysine degradation
OTERR_26550 (fadB)
00380 Tryptophan metabolism
OTERR_26550 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
OTERR_26550 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
OTERR_26550 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
OTERR_26550 (fadB)
00930 Caprolactam degradation
OTERR_26550 (fadB)
Enzymes [BR:
otr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
OTERR_26550 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
OTERR_26550 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
OTERR_26550 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
UDPG_MGDP_dh_N
NAD_binding_2
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
QEL66131
UniProt:
A0A5C1EAW0
LinkDB
All DBs
Position
complement(2989984..2991951)
Genome browser
AA seq
655 aa
AA seq
DB search
MNMNDLNMQQLSHWQLRTDAAGIAWATLDRAGESANTLSKAVLEELDRLLTHLDGQPPKA
LIITSGKSAGFVAGADIGEFTALASPEATKGFVALGWNVFERLAAVPYPTLALVRGHCLG
GGLELAMACRYRVAVDEPGTKFALPEVMLGIFPGWGGMKRLPALVGPQVALDMMLTGRNV
DAKKAKRLGLADECVAPRVMHNAARGLVLSGKPARRMPFMARLLNGPLKGVVANGARKQV
AKKARPEHYPAPYAIIDFWQHHNGNALAAPEVMARITGNDTAKNLVRVFHLQERLKGFGK
DGAFKAQRLHVVGAGVMGGDIAAVAALKGITVTLQDQDLSRIAPAIARAKKLFERRLKDK
LLVRAAMDRLIPDPSGAGAAHADVVIEAIFENLEAKHALLKSLEARMKPEAVLATNTSSL
KIEDLRTVLNRPERLVGIHFFNPVPMMPLVEVVEAGGTDGAAFRNACAFVKQIDKLPLPV
KSAPGFLVNAVLAPYMLEAMRCVDEGIAPETVDAAMEAFGMPMGPIELADTVGLDIAMAA
GKTLAAGAGGNVEPPRCLAEKVAAGNLGKKSGRGFYDFASGKPAKGGAGTVPAGLAQRLV
APLLAKTQQLVDEGIVADAELADAGVIFGTGFAPFTGGPLHYANQRAAGRSTNHG
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaacgacctgaacatgcagcagctcagccactggcaactgcgcaccgacgcc
gctgggatcgcctgggcgaccttggaccgggccggcgaatcggccaatactttgtcgaag
gcggtgctcgaagagctcgaccgcctgctcacccatctcgacggccagcccccgaaggcc
ctgatcatcacctcgggcaagagcgccggcttcgtcgccggggcggacatcggcgaattc
accgccctggcctccccggaagccaccaagggcttcgtcgccctgggctggaacgttttc
gagcggctcgccgccgtgccttatccgaccctggccctggtgcgcggccactgcctgggc
ggcggtctggaactggccatggcctgtcgctaccgggtggcggtggatgagccgggcacc
aagttcgccctgcccgaggtcatgctcggcatcttccccggctggggcggcatgaagcgc
ctgccggccctggtaggcccccaggtagctctggacatgatgctcaccggccgcaacgtg
gacgccaaaaaggccaagcgcctgggcctggccgacgagtgcgtcgccccccgggtgatg
cacaacgccgcccggggtttggtgctctccggcaagccggcccggcgcatgcccttcatg
gcccgcctgctcaacggtccgctcaagggtgtggtggccaacggcgcgcgcaagcaggtg
gccaagaaggcccgccccgagcactacccggccccctacgccatcatcgacttctggcag
caccacaacggtaacgccctggccgcccccgaggtcatggcgcgcatcaccggcaacgat
acggccaagaacctggtgcgggtgttccacctgcaggaacgcctcaagggcttcggcaag
gatggcgctttcaaggcccagcgtctgcatgtggtcggcgccggggtgatgggtggcgac
atcgccgccgtggcggccctgaagggcatcaccgtgaccctgcaggaccaggatctgtcc
cgcattgccccggccattgcccgggcaaagaaattgttcgagcggcgcttgaaggacaag
ctgctggtacgcgccgccatggaccgcctgattcccgacccgagcggtgccggagccgcc
cacgccgacgtggtgatcgaggccatcttcgagaatctggaggccaagcacgccttgctc
aagagtctggaagcgcgcatgaagcccgaggccgtgctggccaccaatacctccagcctg
aagatcgaggacctgcgcacggtgctgaaccggcccgagcggctggtgggcatccacttc
ttcaacccggtgccgatgatgcccctggtcgaggtggtggaagccggcggtactgacggc
gcggccttccgcaacgcctgcgccttcgtcaagcagatcgacaagctgcccctgccggtg
aaaagcgccccgggcttcctggtgaacgcggtgctggccccctacatgctcgaagccatg
cgctgcgtcgatgaaggcattgccccggaaaccgtggatgcggccatggaagccttcggc
atgccgatgggtcctatcgaattggccgacaccgtgggcctggacatcgccatggcggcg
ggcaagaccctggctgccggcgcgggtggcaacgtcgagccgccgcgctgcctggccgag
aaagtggccgccggtaacctgggcaagaagagcggtcgcggcttctacgacttcgccagc
ggcaagccggccaaggggggcgccgggacggttcctgccggattggcgcaacgcctggtg
gcccccttgctggcgaagacgcaacaactggttgatgaaggcatcgtggccgacgcggag
ctggcggacgccggcgtaatattcggcacggggttcgcaccctttaccggcggccccctt
cattacgccaaccagcgcgccgccggccgttccacgaaccacggctga
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