Oryzomicrobium terrae: OTERR_26650
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Entry
OTERR_26650 CDS
T06190
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
otr
Oryzomicrobium terrae
Pathway
otr03420
Nucleotide excision repair
otr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OTERR_26650 (uvrD)
03430 Mismatch repair
OTERR_26650 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otr03400
]
OTERR_26650 (uvrD)
Enzymes [BR:
otr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OTERR_26650 (uvrD)
DNA repair and recombination proteins [BR:
otr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OTERR_26650 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
OTERR_26650 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QEL66141
UniProt:
A0A5C1EAW8
LinkDB
All DBs
Position
complement(3003649..3005946)
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AA seq
765 aa
AA seq
DB search
MIDSSPDSGLLANLNPPQHQAVTLPARSALILAGAGSGKTRVLTTRIAWLIATHQVSPHG
ILAVTFTNKAAKEMVTRLGALIPVNPRGMWIGTFHGLCNRLLRAHYKDAGLPQLFQILDS
ADQLSAIKRLLKNLNVDDEKFPPRELMHFINGHKEQGIRANRAEAWDDYTRRRVALYAEY
EAQCQREGVVDFAELLLRCYELLSHNEPLRAHYQARFRHILVDEFQDTNRLQYAWLKLMA
GFEQRATDAPPAAVFAVGDDDQSIYAFRGAEVGNMREFERDFAQETVIRLEQNYRSHGNI
LDAANALITRNRDRLGKTLWTDAGAGEPIRVYEGMSDLDEARFVVDEIRELVRDGTERSQ
IALLYRSNAQSRVLEHELFSHGVPYRVYGGLRFFERQEVKHALAYLRLIANPDDDTAFMR
VVNFPTRGIGARSLEALQGVAHTTNSSLYNAAASLTGKAGTAVAAFIRLVESLRQETAGL
PLPEAVEHVIERSTLRQHYLGEKEGQDRLENLDELINAAANFDREFAGGEITLDGTPVNG
DDLGAVLAAFLQHASLEAGDHQAGAEEEAVQLMTVHAAKGLEFDVVFISGLEQGLFPHEN
AVMEEGGLEEERRLMYVAITRARKRLYLAHAQTRMLHGQTRYCLPSKFLEELPEELLARV
NSVASRETAYPGWGVSSQSKWNSALPRSEGRGAGMTGATASATPAFAQEGPGKGLRIGQS
VKHAKFGTGVIVAAEGRGSDARVQVNFSGVGVKWLALEYAKLEPV
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgatcgattcttcccccgactccggcctgctggccaatctcaacccacctcaacaccag
gcggtcaccctgccggcccgatcggctttgatcctggctggcgccggttcgggcaagacc
cgggtgctcaccacccgcatcgcctggctgatcgccacccaccaggtcagcccccacggc
atcctggcggtgaccttcaccaacaaggcggccaaggaaatggtcacccgcctgggcgcc
ctgatcccggtgaacccgcgcggaatgtggattggcaccttccacggcctgtgcaaccgg
ctgctgcgcgcccactacaaggacgccggtctgccccagctgttccagatcctcgattcg
gcggaccagctctcggcgatcaagcggctgttgaagaacctcaacgtggacgacgagaag
ttcccgccccgggagctgatgcacttcatcaacggccacaaggagcagggcatccgcgcc
aaccgagccgaggcctgggacgactacacccgccgccgcgttgccctctacgccgaatac
gaggcccagtgccagcgcgagggggtggtggacttcgccgagctgctgctgcgctgctat
gagctgctgtcccacaacgagcccctgcgcgcccattaccaggcccgcttccgccacatc
ctggtggacgagttccaggacaccaaccggcttcaatatgcctggctgaagctgatggcc
ggcttcgaacagcgggctaccgacgccccgccggcggcggtgttcgccgtgggcgacgac
gaccagtcgatctacgccttccgcggcgccgaggtgggcaacatgcgcgagttcgagcgc
gacttcgcccaggagacggtgatccgcctggagcagaactaccgctcccacggcaacatc
ctggacgccgccaacgccctcatcacgcgcaaccgggatcgcctgggcaagaccctgtgg
accgatgccggtgccggcgagccgatccgggtttacgagggtatgtccgacctggacgag
gcccgtttcgtggtggacgagatccgcgagctggtgcgcgacggcaccgagcgcagccag
atcgccctgctgtaccgctccaacgcccagtcccgggtgctggagcacgaactgttcagc
cacggcgtgccttaccgggtctatggcgggctgcgcttcttcgagcgccaggaggtgaag
cacgccctggcctacctgcgcctgatcgccaatccggacgacgacaccgccttcatgcgg
gtggtgaacttccccacccggggcatcggtgcccgttccctggaagccctccagggcgtt
gcccatacgaccaactccagcctgtacaacgccgccgccagtctcaccggcaaggccggc
accgccgtggccgccttcatccgcctggtggaaagcctgcgccaggaaaccgccggcctg
cccctgcccgaagcggtggagcatgtcatcgagcgctccaccctgcgccagcactacctg
ggcgagaaggaaggccaggaccggctggagaacctggacgaactgatcaacgccgccgcc
aacttcgaccgggaattcgccggcggcgaaatcaccctggacggcacgccggtcaatggc
gacgacctgggggcggtactggcggccttcctccagcacgccagcctggaagccggcgac
caccaggccggggcggaagaggaggcggtgcagctgatgaccgtgcacgccgccaagggc
ctggagttcgacgtggtgttcatctccggcctggagcagggcctgttcccccacgagaac
gcggtgatggaagaaggcggcctggaagaagagcgccgcctgatgtacgtggccatcacc
cgggcgcgcaagcgcctctacctggcccatgcccagacccgcatgctgcacggccagacc
cgctactgcctgccgtccaagttcttggaagaactgcccgaagaactgctcgcccgggtc
aatagcgtcgcctcccgggaaaccgcctacccgggctggggcgtttcgtcccagagcaag
tggaacagcgccctgccccgcagcgagggtcgcggtgccggcatgaccggggctaccgcg
tcagccaccccggctttcgcccaggaaggcccgggcaagggcctgcgcatcggccagagc
gtcaagcacgccaagttcggcaccggggtgatcgtcgccgccgagggacggggcagcgac
gcccgggtccaggtcaatttcagcggcgtcggggtgaagtggctggccctggagtacgcc
aagctcgaacccgtctga
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