Oryzomicrobium terrae: OTERR_26690
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Entry
OTERR_26690 CDS
T06190
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
otr
Oryzomicrobium terrae
Pathway
otr03030
DNA replication
otr03430
Mismatch repair
otr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OTERR_26690 (holA)
03430 Mismatch repair
OTERR_26690 (holA)
03440 Homologous recombination
OTERR_26690 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otr03032
]
OTERR_26690 (holA)
03400 DNA repair and recombination proteins [BR:
otr03400
]
OTERR_26690 (holA)
Enzymes [BR:
otr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OTERR_26690 (holA)
DNA replication proteins [BR:
otr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OTERR_26690 (holA)
DNA repair and recombination proteins [BR:
otr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OTERR_26690 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
QEL66145
UniProt:
A0A5C1EBT0
LinkDB
All DBs
Position
3010009..3011061
Genome browser
AA seq
350 aa
AA seq
DB search
MILKGDALAAHLEGGRPLAALYVLHGDEPLLVIEAGDAIRAAARQRGFTERDVLTVLPGF
NWGELFSRGGNLSLFGDKSLLDLRIPSGKPGRDGSEALQRYCGQLADDSLMLVTLPELNW
QDEKSAWFTALEKAGVVIKLNAPRLNELPAWIAGRLARQQQRASRDALHFLAERVEGNLL
AAHQEIQKLALLYPTGREAAELTLEQIKDAVLDVARYDLDSLREALLAGDTGRMARILDA
LRQSGEALPLVIWAVTEEVRALATLSQGVAAGRPLDTLLKEARVWGPRQGMLKQALGRLD
GDRTTRALKRVARIDRIAKGIEDGDPWLELLRLGMEIGAPARRRPMAATR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgattctcaagggagacgctctcgctgcgcacctggaaggcgggcggccactcgccgcc
ctctacgtgctgcacggggacgaacccctgctggtcatcgaggccggcgacgcgatccgg
gccgccgcccggcagcgcggcttcaccgaacgggacgtcctcaccgtcctgcccggcttc
aactggggcgaactgttctcccggggcggcaatctttccctgttcggcgacaagagcctg
ctcgacctgcgcatcccctcgggtaagcccggacgggacggctccgaggccctgcaacgc
tactgtggccagctcgccgacgacagcctgatgctggtcaccctgccggaactcaactgg
caggatgaaaaatccgcctggttcaccgccctggaaaaggccggggtggtgatcaagctg
aatgctccccggctcaacgaactacccgcctggatcgccgggcggctggcccggcagcag
cagcgcgccagccgggacgccctgcacttcctggcggaacgggtggaaggcaacctgctc
gccgcccaccaggaaatccagaaattggccctgctctatccgacgggccgggaagctgcg
gaactgaccctggaacagatcaaggatgcggttctcgatgtggcccgctacgacctggac
agtctgcgcgaagccctgctggccggcgacactggccgaatggcgcgcattctcgacgcc
ttgcgccagagcggcgaagccctgcccctggtgatctgggcggtgacggaagaagtgcgg
gccctggcaacgttgagccagggcgtggcggcgggccgccccctcgatacgctactcaag
gaagcccgggtgtgggggccgcgccaagggatgctcaagcaagccttaggaagactggat
ggggatcggacaacccgtgcgctgaagcgggtggcgcgaatcgacaggatcgccaagggg
atcgaagatggcgatccctggctggaactgctgcgactgggaatggaaatcggggctccc
gcgcggcggcgccccatggcggcaacccgttag
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