Oryzomicrobium terrae: OTERR_29010
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Entry
OTERR_29010 CDS
T06190
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
otr
Oryzomicrobium terrae
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otr03400
]
OTERR_29010 (phrB)
Enzymes [BR:
otr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
OTERR_29010 (phrB)
DNA repair and recombination proteins [BR:
otr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
OTERR_29010 (phrB)
Prokaryotic type
OTERR_29010 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QEL66377
UniProt:
A0A5C1EE10
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All DBs
Position
complement(3282207..3283709)
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AA seq
500 aa
AA seq
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MPPASSLPAVSAPPSREIALVWFRRDLRDYDHAALYHALKSARRVFCVFVFDRDILDPLP
RQDRRVEFLHGSIGELAGALRARGGGLIVRHGRPHEEIPRLAVALGAGTVFANRDYEPAA
ITRDELVAQALAESGVAFRATKDQAVFDGDEVLTQGGAPFSVFTPYKNAWLKRLAAPGGD
FYLRPYPTEGAAFGTLAAPPADLDQPLPSLADLGFAPTNLADLKVLPGMAGARARLADFL
PRLARYKALRDFPGVKGVSYLSVHLRFGTLSIRELAGLAWRDGSEGAQAWLNELIWRDFY
FMILARHPRVVGACFRPEYDALAWDEGPDADERFAAWCAGRTGYPLVDAAQRQLNQTGYM
HNRLRMVSASFLTKDLGIDWRRGEAYFAEQLIDFDLAANNGGWQWAASTGCDAQPYFRIF
NPVTQSEKFDPEGHFIRRYVPELATVPAKYLHAPWTMGPLVQEACEVKIGRDYPAPVVDH
ASARETTLARFAAVKGAAAE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgccaccagcctcgtccttgccggccgtatcggcgcctccttcccgggagatcgccctg
gtctggtttcgccgcgatctgcgcgactacgatcatgccgcgctttaccacgccttgaag
agcgcccggcgggtgttctgcgtcttcgtcttcgaccgggacatcctcgatcccttgccg
cgccaggatcggcgcgtcgagttcctccacggcagcatcggcgaactggccggggcgttg
cgggcgcgggggggcgggctgattgtccgtcatggccggccccacgaggaaattccccgc
ctggcggtcgccctgggggcgggaacggtgttcgccaaccgggattacgagcccgcggcg
atcacccgggacgagttggtggcccaggctctggccgagtccggggtcgcctttcgcgcc
accaaggaccaggcggtgttcgacggtgatgaggtgctcacccagggcggtgcgccgttt
tccgtgttcaccccctacaagaacgcctggctgaaacgcttggcggccccggggggcgac
ttctacctgcgcccctacccgaccgagggggccgctttcggcaccctggccgcgccgccg
gccgaccttgaccaacccctgcccagcctggccgacctgggctttgcccccaccaacctg
gcggacctgaaggtgctgcccggcatggccggcgcccgggcgcggctggccgactttctg
ccccggctggcgcgctacaaggccctacgcgacttccccggggtgaagggcgtttcctac
ctgtcggtgcacctgcgctttggcaccctgtcgatccgggaactggccggcctggcctgg
cgcgatggcagcgaaggggcccaggcctggctcaacgagctgatctggcgcgacttctac
ttcatgatcctggcccgccatccccgggtggtcggcgcctgcttccgccccgagtacgac
gccctggcctgggacgaggggccggatgcggacgagcgctttgctgcctggtgcgccggg
cgcaccggctaccccctggtggatgcggcccagcgccagctcaaccagaccggctacatg
cacaaccggctgcgcatggtctccgcctcgttcctgaccaaggacctgggcatcgactgg
cggcgcggcgaggcctacttcgccgaacagctgatcgacttcgacctggccgccaacaac
ggcggctggcagtgggcggcctccaccggctgcgacgcccagccctacttccgcatcttc
aacccggtcacccagtcggagaagttcgacccggagggccacttcatccgccgctacgtg
cccgagctggcgacggtgccggccaagtacctgcacgcgccgtggaccatgggccccctg
gtgcaggaggcctgcgaagtgaagatcggccgggactacccggccccggtggtggaccac
gccagcgctcgggagacgaccctggcgcgcttcgccgcagtcaagggggcggcggcggag
tag
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