Orientia tsutsugamushi Boryong: OTBS_0440
Help
Entry
OTBS_0440 CDS
T00531
Symbol
hupA
Name
(GenBank) histone-like DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
ots
Orientia tsutsugamushi Boryong
Brite
KEGG Orthology (KO) [BR:
ots00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ots03032
]
OTBS_0440 (hupA)
03036 Chromosome and associated proteins [BR:
ots03036
]
OTBS_0440 (hupA)
03400 DNA repair and recombination proteins [BR:
ots03400
]
OTBS_0440 (hupA)
DNA replication proteins [BR:
ots03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OTBS_0440 (hupA)
Chromosome and associated proteins [BR:
ots03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OTBS_0440 (hupA)
DNA repair and recombination proteins [BR:
ots03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OTBS_0440 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
FtsH_ext
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
CAM79506
UniProt:
A5CCR4
LinkDB
All DBs
Position
complement(415179..415556)
Genome browser
AA seq
125 aa
AA seq
DB search
MVQCNFYYYFIIILLFYYYLRRFMSTNNQEREALNKAEFVNFIHKNNTNMTKADIERALN
LILRGVEKAIENGHDINIVGFGSFCVRFRAARDGHNPKTGAKIIIPESYQVVFKPGKTLK
DACNN
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
ttggtacaatgtaacttttattattattttattattattttattattttattattattta
aggagatttatgagcacaaataatcaagaaagagaagcactaaacaaagctgaatttgta
aattttatacataaaaataatacaaatatgactaaggctgatatagagcgagcattaaac
ttaatattgcgtggcgttgaaaaggctattgaaaatggtcatgatataaatattgtaggc
tttggaagcttttgtgtaagatttagagcagcaagagatggacacaatcctaaaactgga
gctaaaattattattcctgaaagttatcaggtagtttttaaaccaggtaaaacattaaaa
gatgcatgtaataattaa
DBGET
integrated database retrieval system
