Orientia tsutsugamushi Boryong: OTBS_1012
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Entry
OTBS_1012 CDS
T00531
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
ots
Orientia tsutsugamushi Boryong
Pathway
ots03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ots00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OTBS_1012 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ots03021
]
OTBS_1012 (rho)
03019 Messenger RNA biogenesis [BR:
ots03019
]
OTBS_1012 (rho)
Transcription machinery [BR:
ots03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
OTBS_1012 (rho)
Messenger RNA biogenesis [BR:
ots03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OTBS_1012 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
AAA_22
NACHT
AAA
OB_RNB
Mor
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
CAM80078
UniProt:
A5CDS5
LinkDB
All DBs
Position
997544..999049
Genome browser
AA seq
501 aa
AA seq
DB search
MTTEKEHRIKNILKPVSNNNPANSEAVDSSVEITAHLNEPKKKSPEALQCYAESKEHRIK
KPSKPVSNNNQVNIEAVDSSVEITVHLNELKKKSPEALQCYAESLAIENASSLTKNELIS
AILKMVVERNGTVIEEGVIEILNGGFGFLRSPEVNYLSGAGDIYVSLSQIKRCELRTGDT
VEGQIRAPKSGERYFALLKVLKVNGEDIKKSIQRLHFDDLVALYPEEKIFFEVDLDYKNL
STRVMELVSPMGKGQRALIVAPPRTGKTILLQNIAHSIATNHPEIYLIVLLIGERPEEVT
DMIRSVKGEVVSSTFDEPAVRHTQLAEIVIEKAKRLVEHKRDVVILLDSITRLARAYNTV
VPSSGKVLTGGVDSNALQKPKSFFGAARNIENGGSLTIIATALVDTGSRMDEVIFEEFKG
TGNSEIVLDRKISDKRIYPAIDINKSGTRKEELLVGKSELSKMWMLRRIINQMGAVDAME
FLLDKLKNTKSNSEFFDLMNS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgactacagaaaaagaacatagaataaaaaacatattaaaacctgtatctaataataat
ccagccaacagcgaagctgtagattcttcagttgaaataactgctcatttgaacgaacca
aagaaaaaatctcctgaagccttgcaatgttatgctgaaagtaaagaacatagaataaaa
aaaccatccaaacctgtatctaacaataatcaagttaacatcgaagctgtagattcttca
gttgaaataactgttcatttgaacgaactaaagaaaaaatctcctgaagcattgcaatgt
tatgctgaaagtttagcaattgaaaatgctagttcattaactaagaatgaactaatatca
gctattttaaaaatggtagtagaacgtaatggtacagttattgaagaaggagtaattgaa
attttaaacggaggatttggttttttacgatcaccagaagtaaattatttatcaggagca
ggagatatttatgtatctttaagtcagattaaacgttgtgaattacgcactggagatact
gttgaaggacaaattagagctccaaagtctggagaacgttactttgctttattaaaagta
ctaaaagttaatggagaagatattaaaaaatctattcaacggctacattttgatgattta
gtagctttatacccagaggaaaaaattttttttgaagttgatctagattataaaaacctt
agtactagagttatggaactagtttcacctatggggaaagggcaacgagctcttatagtc
gctccgcctcgtactggtaaaacaattttattgcagaacattgctcattctattgctact
aatcatcctgaaatttacctaatagtattgctaataggagaaaggccagaagaagttacc
gatatgattaggtcagttaaaggagaagttgtaagttctacttttgatgagccagcagta
cggcatactcaactagctgaaattgtaattgaaaaagcaaaaagattggtagagcataaa
agagatgtagtaatattactggattcaatcactagactagctagggcatacaatactgtt
gttccatcttcaggtaaggtactaactggtggagttgattcaaacgctttacaaaaacca
aaaagcttttttggagcagctcgtaatatcgaaaatggtgggtctttaactattattgca
actgcattagttgatacaggttctagaatggatgaagtgatttttgaggagtttaaagga
actggcaactcagaaattgtattagacagaaagatatctgataaaagaatctatccagca
attgatattaataaatctggcactagaaaagaggagctgttagttggtaaatcagaatta
tcaaaaatgtggatgcttagaagaattattaatcaaatgggagctgtggacgctatggaa
tttttacttgataaacttaaaaacactaaatctaatagtgaattctttgatttgatgaat
tcatag
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