Orientia tsutsugamushi Boryong: OTBS_2145
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Entry
OTBS_2145 CDS
T00531
Symbol
holB
Name
(GenBank) DNA polymerase III delta subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ots
Orientia tsutsugamushi Boryong
Pathway
ots03030
DNA replication
ots03430
Mismatch repair
ots03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ots00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OTBS_2145 (holB)
03430 Mismatch repair
OTBS_2145 (holB)
03440 Homologous recombination
OTBS_2145 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ots03032
]
OTBS_2145 (holB)
03400 DNA repair and recombination proteins [BR:
ots03400
]
OTBS_2145 (holB)
Enzymes [BR:
ots01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OTBS_2145 (holB)
DNA replication proteins [BR:
ots03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OTBS_2145 (holB)
DNA repair and recombination proteins [BR:
ots03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OTBS_2145 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
CAM81240
UniProt:
A5CFM3
LinkDB
All DBs
Position
complement(2086499..2087371)
Genome browser
AA seq
290 aa
AA seq
DB search
MLNTLIKNWQNNIFANAWIINTDNSDSAMSILLKFCNKILNHHDDAVFHQDMILVKRRSM
NGNSNDKFITVDQIRDMLFFLNKTPIKSAIKIAIIYEAEYMNINSANCCLKILEDPPINR
YIFLITTKFASILSTIKSRCHLLTQKFDHCNNTALAAYSEVEYQNLINMLNAQTIKIQLE
FIQKIKSIQLNSQEWYKFGQACMILIAKSIRYKVGFKEAEDCSKNDCAIAEMKVIEKISN
TNSTEELVQKYDKVSNILYNTSNVDLDVCNATLLILSLMQNQLNFHENNN
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatactctcataaaaaattggcaaaataatatttttgctaatgcttggataatt
aatactgataactctgatagtgctatgagtattttactgaaattttgcaataaaatactc
aatcaccatgatgatgctgtttttcaccaagatatgattttagttaaacgtaggtctatg
aatggtaatagcaatgataaatttattactgttgatcaaatacgtgatatgctatttttt
ctgaataaaacaccgataaaatcagctataaaaattgcaattatatacgaagcagaatat
atgaatattaattctgctaattgttgtcttaaaatacttgaagatccaccgattaatcgc
tatattttcttaattactactaaatttgcaagcatactttctacaattaaatcgcgttgc
catttacttactcaaaaatttgatcattgtaataatactgcattagcagcatattctgaa
gttgaataccaaaatctaattaatatgcttaatgcccaaactataaagattcaattagaa
tttattcaaaaaataaaatctatacaactcaattcacaagaatggtataaatttggtcaa
gcttgcatgatattaatcgcaaaatctatcagatataaagttggctttaaggaagctgaa
gattgtagcaagaatgattgcgctattgctgaaatgaaagttattgaaaaaatcagcaat
actaactcaactgaggagctagttcaaaaatatgataaggtaagtaatattctatacaac
actagcaatgttgacttagatgtttgtaatgctacgttattaatattatcactaatgcaa
aatcaattgaattttcatgaaaataacaattag
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