Orientia tsutsugamushi Ikeda: OTT_0025
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Entry
OTT_0025 CDS
T00705
Symbol
hupA
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
ott
Orientia tsutsugamushi Ikeda
Brite
KEGG Orthology (KO) [BR:
ott00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ott03032
]
OTT_0025 (hupA)
03036 Chromosome and associated proteins [BR:
ott03036
]
OTT_0025 (hupA)
03400 DNA repair and recombination proteins [BR:
ott03400
]
OTT_0025 (hupA)
DNA replication proteins [BR:
ott03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OTT_0025 (hupA)
Chromosome and associated proteins [BR:
ott03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OTT_0025 (hupA)
DNA repair and recombination proteins [BR:
ott03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OTT_0025 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_euk_2
DnaI_N
Motif
Other DBs
NCBI-ProteinID:
BAG39483
UniProt:
B3CQE4
LinkDB
All DBs
Position
31920..32228
Genome browser
AA seq
102 aa
AA seq
DB search
MSTNNQEREALNKAEFVNFIHKNNTNMTKADIERALNLILRGVEKAIENGHDINIVGFGS
FCVRFRAARDGHNPKTGAKIIIPESYQVVFKPGKTLKDACNN
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaataatcaagaaagagaagcgctaaacaaagctgaatttgtaaattttata
cataaaaataatacaaatatgactaaggctgatatagagcgagcattaaacttaatattg
cgtggcgttgaaaaggctattgaaaacggtcatgatataaatattgtaggctttggaagc
ttttgtgtaagatttagagcagcaagagatggacacaatcctaaaactggggctaaaatt
attattcctgaaagttatcaggtagtttttaaaccaggtaaaaccttaaaagatgcatgt
aataattaa
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