Orientia tsutsugamushi Ikeda: OTT_0081
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Entry
OTT_0081 CDS
T00705
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ott
Orientia tsutsugamushi Ikeda
Pathway
ott03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ott00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OTT_0081 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ott03400
]
OTT_0081 (recD)
Enzymes [BR:
ott01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OTT_0081 (recD)
DNA repair and recombination proteins [BR:
ott03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OTT_0081 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
PIF1
RsgA_GTPase
AAA_22
nSTAND3
NTPase_1
NPHP3_N
T2SSE
DEAD
UvrD_C
UvrD-helicase
NACHT
AAA
AAA_16
ATP-synt_ab
MeaB
AAA_14
AAA_29
ABC_tran
HHH_2
KAP_NTPase
NB-ARC
HHH
SKI
cobW
ATPase_2
SLFN-g3_helicase
AAA_28
AAA_12
MobB
ATP_bind_1
MMR_HSR1
Helicase_RecD
DAP3
SRP54
TsaE
TrwB_AAD_bind
Zeta_toxin
TraE
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BAG39539
UniProt:
B3CQP0
LinkDB
All DBs
Position
84276..86471
Genome browser
AA seq
731 aa
AA seq
DB search
MSVFSYSTKASSINNQSLAGLVERVTFHNTDNGFCIIKVKVNHKKDLITVIGNSATISAG
QHIEASGIWFNDKEYGLQFKAHTLKVSVPTSIEGIEKYLASGLIKGIGPIYAKKLVQTFG
LDVLTVIENQDPALKKVPGIGPIRAKKIWESWNSQKIISDIMLFIHNYNIGASKAVKIYK
AYGAEAINIIKSNPYQLVSDIKGIGFKSADNIAKAIGIPENSMIRARAGLNYALVTAMSN
GSCGMPTDKLINLCHELLNIDVSIIIDALSFEINERNVAVENINGEECIFLKGLAYAELK
IAELLVHISKGKLAWNPISSNKITEYISKANIKLSPSQQDALHQALKSKVMIITGGPGVG
KTTLINSIINILKSEGVVILLAAPTGRAAKRLSEATQHPAHTIHRLVYSRPGQDVRTITK
LKCQLLILDEMSMVDVTTMYAAISALPSTASLFLVGDIDQLPSVGPGQVFSDLIKSQKFP
IVTLTEIFRQNNQSSIISNAHRINNGFFPILQSSQNSNNDFYFINSDTPEDAIDKITELV
QVRLPKKFSISPFTDIQILSPITRGIVGTKNLNSVLQKVLLPSTSANDELLIWGNVFKIG
DKVMQIVNNYDKDIYNGDIGIINTIDHENQNIVINFDGNKISYDFDELDEIVLAYAITIH
KSQGGEYHTVIIPLMMQHYPMLQRKLIYTAITRAKKLVIVVGQKKALNIAIKKNIAELRY
SMLKKKLMDIT
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtattttcttactctacaaaagcctcgtctatcaataatcaaagtttagcagga
ttagtagaaagagtaacttttcataatactgacaatggattttgcatcattaaagttaaa
gtcaatcataagaaagacttaataacagtaattggtaacagtgccaccatttcagctgga
cagcatattgaagctagcggcatatggtttaatgataaagaatatggactgcagtttaaa
gctcatacattaaaagtttcagtaccaacaagtatagagggtatagaaaaatatttagca
tctggattgattaaaggcattggtccgatatatgctaaaaaattagtccaaacatttggc
ttggatgttcttacagtaattgaaaatcaggatccagcattaaaaaaggtgccaggaata
ggtccaattcgtgcaaaaaaaatttgggaaagttggaatagccagaaaattataagtgat
ataatgctgtttattcataactataatattggcgctagtaaagctgttaaaatatataag
gcttatggagcagaagcaataaatattattaaatctaatccctatcaattagtatcggat
attaaaggcatagggtttaaaagtgcagataacattgcaaaagctattggcattccagaa
aattcaatgataagagcacgagctgggctaaattatgctctagttacagctatgagtaat
ggtagttgtggcatgccaactgataagctaattaatctatgtcatgagttgttaaatatt
gatgttagcattataattgatgcactatcctttgaaatcaatgaacgaaatgttgctgtt
gaaaacataaatggtgaagaatgtatatttcttaagggattagcttatgcagagcttaaa
atagccgaattattagtccatattagtaaaggtaaactagcatggaatccaatcagcagc
aataaaataacagaatacataagtaaggcaaatatcaaactatcacctagtcagcaagat
gctcttcatcaagctttgaagtctaaagtaatgattattactggaggtcctggagttggc
aaaactactttaatcaattccataattaatattctaaaaagtgaaggagttgtaatattg
cttgctgctccaactggcagagcagcaaagaggttaagcgaagctactcaacatcccgct
catactattcatcgtttagtatatagtcgtccaggacaagatgtacgaacaatcacaaaa
ctcaaatgtcagttattaatattagatgaaatgtcaatggttgatgttacaacaatgtat
gcagcaataagcgcactgccaagcactgcttctctctttttagtcggagatattgatcaa
ctgccatcagtaggaccaggtcaggtttttagtgatttaattaagtctcaaaaatttcct
atagtaacattaacagaaatttttaggcaaaataatcaaagtagcattattagcaatgcc
catagaattaataacggattttttccaattttacaatctagccaaaactcaaataatgat
ttttattttattaatagcgatacaccagaggatgcgattgataaaataactgaattagtt
caggtacgcttaccaaaaaaattttctatttctccatttacagatatacaaatattatct
ccaataaccagaggaattgtaggaacaaagaatctcaattcagtattacaaaaagtacta
ttaccaagtacctcagcaaatgatgaattacttatttggggcaatgtgtttaaaattggt
gataaggttatgcaaatagttaataattatgataaagatatatataacggtgacatagga
attattaatacaattgatcatgaaaaccaaaatatagtaataaactttgatggtaataaa
ataagctatgattttgatgagcttgatgaaatagtacttgcttatgctattactattcat
aagtcacaaggtggagaataccacactgtaattattccattaatgatgcaacattatcct
atgctacaacgaaagttaatttatactgctattaccagagcaaaaaagttagttattgtt
gttggtcaaaaaaaagcattaaatatcgctattaaaaaaaacatagcagaactaaggtat
tctatgctcaagaaaaaattaatggatataacttaa
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