Orientia tsutsugamushi Ikeda: OTT_0501
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Entry
OTT_0501 CDS
T00705
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ott
Orientia tsutsugamushi Ikeda
Pathway
ott03420
Nucleotide excision repair
ott03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ott00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OTT_0501 (uvrD)
03430 Mismatch repair
OTT_0501 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ott03400
]
OTT_0501 (uvrD)
Enzymes [BR:
ott01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OTT_0501 (uvrD)
DNA repair and recombination proteins [BR:
ott03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OTT_0501 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
OTT_0501 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_14
BrnT_toxin
OLD-like_TOPRIM_1
Motif
Other DBs
NCBI-ProteinID:
BAG39959
UniProt:
B3CR52
LinkDB
All DBs
Position
517545..519695
Genome browser
AA seq
716 aa
AA seq
DB search
MSQYLLDLNPEQREAVITTNGPLLVLAGAGTGKTRVITYRIAYIIDQFMALPEEILAVTF
TNKAATEMQSRIAEITNNTTGIYIGTFHAIATKILKAHAELVGLTSSFSIIDQSEQVRVI
KNICETHGISTKNYSPKDICEIISRWKDLGEQHKIDCHTPIYQVAQKIYQHYQTELQQSN
VVDFGDLLLYNMKIFSEYPDVLNFYQTKFKYVFIDEYQDTNNVQYFWAKALVNLHENLCC
VGDDDQSIYSWRGANIENILKFKDDFKNAKLIKLEQNYRSTNSILTAASSIICNNKYRHD
KKLWTNKQSDQPIRIVYCYNDREEARFISSEIKKLITKSPNLSIAVLVRSSSQAHVLEES
FFSNNIKYQVIGGFRFFDRMEIADMIAYLRVLVNHNDNLALTRIINVPKRSIGPATLHTI
KEYAQQHESSMFTAIEQILSKKLLKPQLELTLQNLINKFKEWRSLYKAGYTPAKVTEIIC
DDSNYLQMLKDDKSSQSDRRIENIQEMIRAMLDYSSIEEFLEHASLFLERDNGINAKDNS
VVSLMTLHASKGLEFDVVFLPGWEEGVFPHQKSLIVEDQRALEEERRIAYVGITRAKQSL
YISYTDQRRIFNEFVKLQPSRFLLDIPDSISLSTTSIIHYSSAANNNYFQKLSSAAVPNS
QSKASSKFFTGAKVLHKQFGQGTVIRIMNDNIEVAFYVGGIKTIKQQFLTINARLR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtatttattagatctaaatccagaacaacgagaagcagtaataactactaat
ggtccattgttagtattagctggggctggcacaggtaaaacaagagtgataacttatcgt
attgcttatattattgaccaatttatggcattaccagaagaaattcttgcagtaacattt
actaataaagccgcaacagaaatgcaatcgcgtatcgcagaaataactaacaatactaca
ggtatatacattggaacttttcatgctattgctactaaaattcttaaagcacatgctgag
ttggtagggttaacatcatcattttcaataatagaccaatctgaacaagtcagagttatt
aaaaatatttgtgaaacacatggcatttcaacaaaaaattattccccaaaagatatttgc
gaaataataagtagatggaaagatcttggtgagcagcataagatagattgccatactcct
atttatcaagttgcacaaaaaatctaccaacattatcaaacagaattacaacaatcaaat
gtagttgattttggagatttattattatacaacatgaaaattttcagtgaatatccggat
gttttaaatttttatcaaacaaaatttaagtatgtttttattgatgaatatcaagatact
aataatgttcagtatttttgggctaaagctttagtcaatttgcatgaaaatttatgttgt
gtaggtgatgacgaccaatcaatttatagttggagaggagcaaacatagaaaatatttta
aagtttaaagacgacttcaaaaacgctaagttaattaagcttgagcaaaattatagatca
actaatagcattttaacagcagctagtagtatcatttgcaacaataaatatcgtcatgat
aaaaaactatggactaataaacaatctgatcaaccaataaggattgtatattgttataat
gatcgtgaagaagcacggtttattagctctgaaattaaaaaattaataactaaatcacct
aatctttccattgctgtactagttagatctagctcccaagctcatgttttagaagagtca
ttttttagcaataatataaaatatcaagtaattggtgggtttagattttttgatagaatg
gaaattgcagatatgatagcatatttgcgagtactagtaaatcacaatgataatttagca
ttaactagaattattaatgtacctaaaagatctattggtccagcaacattacatactatt
aaggagtatgctcagcaacatgaaagttcaatgtttactgcgattgagcagatattaagt
aaaaaacttttaaaacctcagctagagttaacattacaaaatttaattaacaaatttaaa
gaatggcgttctctatataaagctggttatactcctgctaaggtaactgaaattatttgc
gatgactctaattatttacaaatgttaaaagatgataaatcttctcagagcgacagaaga
atagaaaatattcaagaaatgattagagcaatgctagattatagtagtatcgaagagttt
ttagaacatgcaagtttatttttggaacgagataatggtattaacgctaaagataatagc
gtagttagcttaatgactttacatgcatctaagggtttagaatttgatgtagtattttta
cctggatgggaagaaggagttttccctcatcaaaaatcacttattgttgaagatcaaaga
gctttagaagaagaaagaaggatagcttatgttggaattaccagagctaaacaaagttta
tacattagttatactgatcaaagaagaatatttaatgaatttgtaaaactacaaccgtca
agatttttattagatatacctgatagtatatcattatctacaacttcaataatacattat
agcagtgctgctaataacaactattttcaaaaattatcatcagcagcagtgcctaattcc
caatctaaggcttcaagcaaattttttacaggtgcaaaagttctgcataaacaatttggg
caaggcacagtaataaggattatgaatgataacattgaagtagcattttacgttggtgga
ataaaaactataaaacagcaattcttaactattaacgctagattaagataa
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