Orientia tsutsugamushi Ikeda: OTT_0834
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Entry
OTT_0834 CDS
T00705
Symbol
sca1
Name
(GenBank) cell surface antigen
Organism
ott
Orientia tsutsugamushi Ikeda
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
120_Rick_ant
Rx_N
Motif
Other DBs
NCBI-ProteinID:
BAG40292
UniProt:
B3CSJ1
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All DBs
Position
complement(877294..880146)
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AA seq
950 aa
AA seq
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MAPDNKPINNKSSGLISKSQEQNIKDLGKKIDLMIQQVDTLDSKMRSRSAECNTLNVKVI
RALNNVMKSVPETLQQFSQEILHQSKLARQQPQKGQYNDAFRKKRAEAKEKKEHLEKQKQ
EFMGLVSKLGEEMKLVGKPGGQMSEIKDTLDKLHAIVNKSAQHQLQNTLGELQAMINEHK
QNQLQDALDDLENIINDHKQNQKEQKAPISPETHAHDVTSIKNQAQQNAGINQPDAPKSA
SKSAADISQSPQRSSPATPTGTGQQHEQKKTPPPVPPKPSKNTMEAINAKIAQAQQNAGI
NQPDAPKSASKSAADIPQSPQHSSPVTPTATVQQHEPQKTPPPVPPKPGKDTIEELKAKI
AQAQQNAGINQPDASKSASKSAADISQSTQHSSPVTPTATAQQQEPQKTPPPVPPKPSKN
IIEELKAKISQTQQQVDRQSYINPSSSPQPLSSTIEHAKDRVLTLDLQYRHAQAAQNMSG
PDAETNQMPVDQILQAFKDLKALINSVIAEDDKFKVWQQQNQSKSLDDFKRDTTQMDSLS
QETKELLSSIGSAGCANIMGSTANIEQAQQMSFAASFSTLDWATHANSVGNTTQKTITND
AGEKVTDLISHSHKTQLSASVNGVTKTVTKHRTIDIPRAVEENKGPLDLALVAQDETGKN
MSESKAVYLTAHYNQEGKLVEMTHPEPLRFFSDEPGSPAYTVINNEVYTLPITKEKYDQL
TKEISQNIQEQDKDKEREQEAVDKFTVGSRQTDIHKEKSIQQADEVSNDDPKSLKSMNEF
TIGSHQTSDIYNEKSTRNPEEISSDAPKSLKSIAPDENKTQIQSKTDHKLQNSNEYVQHM
INSFNQNYNKIDSNEQNRTEEVKLKPVVKSIPESPKNSTQIDPNEEGRSGYVKRVVESME
QTLQNHSEIAQRLQVNLANSSQHSSSTSITTPTNTPRNNNKSKSQTKGIG
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggctccagacaataaaccaattaacaacaaatcttcaggcttaatatcaaaatcacaa
gagcaaaatattaaagatcttggcaagaaaatagatttaatgatacaacaagttgatact
cttgatagtaaaatgcgatcaaggtcagcagaatgcaatacactaaatgttaaagtaatt
agagcattaaataatgtaatgaagagtgtgccagagacgctacaacaattctcgcaagaa
atacttcatcagtctaaactagcacgtcaacaacctcaaaaaggtcaatataatgatgcc
tttcgtaagaaaagagctgaggctaaagaaaaaaaagaacaccttgaaaagcaaaagcaa
gaattcatggggttagtatctaaattaggcgaggaaatgaagctagtaggcaaaccaggt
ggacagatgtctgagataaaagatactctagataagcttcatgcaatagttaacaagtca
gcacagcatcaactgcaaaatactcttggtgagcttcaggcaatgattaatgaacataaa
cagaaccagctacaagatgctctagatgatctggaaaatataatcaacgatcataaacag
aatcaaaaagaacagaaggctcctatttcacctgaaacacatgcacatgatgtaacgtct
attaaaaatcaagctcaacaaaatgctggtatcaatcaaccagatgcacctaaatctgct
agcaaatcagcagcagatatatcacaatctcctcagcgttcttctccagcaacgccaact
ggcacagggcaacaacatgaacaaaaaaaaacacctcctcctgttccacctaaacctagt
aaaaatacaatggaagctataaatgctaaaatagctcaagctcaacaaaatgctggtatt
aatcaaccagatgcacctaaatctgctagcaaatcagcagcagatataccacaatctcct
cagcattcttctccagtaacaccaactgctacagtgcaacaacacgagccacaaaaaacg
cctcctcctgttccacctaaacctggtaaagatacaatagaggaattaaaggctaaaata
gctcaagctcaacaaaatgctggtattaatcaaccagatgcatctaaatctgctagcaaa
tcagcagcagatatatcacaatctactcagcattcttctccagtaacaccaactgctaca
gcacaacaacaagagccacaaaaaacacctcctcctgttccacctaaacctagtaaaaat
ataatcgaagaattaaaagctaagatatcacaaactcaacaacaggttgaccggcaatca
tatattaatccaagtagtagtccccaacctcttagttcaactatagagcatgctaaagac
agagtattaacattagatctacaatatagacatgctcaagctgctcaaaatatgagtgga
ccagatgctgaaacaaatcagatgccagtagatcaaattctacaagcatttaaagattta
aaagcacttataaatagtgtgattgctgaagatgataagtttaaagtatggcaacagcaa
aatcaaagcaaaagcctagatgattttaaacgtgatacaacacaaatggatagcttatct
caagagactaaagagttactatctagcatcggatctgcaggatgtgctaacattatgggc
tcaacagcaaatattgaacaagctcagcaaatgtcatttgctgcatcttttagtacatta
gattgggctactcatgctaattctgttggcaatactactcaaaaaactattaccaatgat
gctggtgaaaaagttacagaccttataagccatagccataaaactcagctcagtgctagt
gttaatggtgttacaaaaactgttactaaacaccgtaccatagatattccaagggcagtt
gaagaaaacaaaggacctttagatcttgctttagtagcacaagatgaaactggaaaaaat
atgtctgagtcaaaagcagtgtatctaactgctcattataaccaagaaggaaaattagta
gaaatgactcatcctgaacctctgagattctttagtgatgagcctggctctccagcttat
acagttataaataatgaagtttatactttgccaattactaaagaaaaatatgaccagcta
accaaagaaatatcacaaaatatacaggaacaagacaaagataaagagagagaacaggaa
gctgtggataagtttacagttggttctcgtcaaactgatattcataaagaaaaaagtatt
caacaggctgatgaagtaagtaacgatgatcctaaatccttaaagtctatgaatgagttt
acaataggctctcatcaaactagtgatatctataacgagaaaagtactcgaaatcctgaa
gaaataagtagcgatgctcctaaatctttaaagtctattgctcctgatgaaaacaaaacc
caaattcaaagcaaaactgatcataaattgcaaaacagcaatgaatatgttcaacatatg
attaactcgtttaatcaaaactataacaaaattgattctaacgagcaaaatcgtactgaa
gaggtaaaactgaagcctgtagtcaaatcaataccagaatcaccaaaaaactctactcag
atcgatcctaatgaggaaggtaggagtggatatgtaaaacgtgtggttgaatcaatggaa
caaacattacaaaatcatagtgagatagcacaaagattacaggtaaatctagctaatagt
tctcagcatagttctagtacatctattactactcctactaatactcctcgcaataataac
aaaagcaaatctcagacaaaaggtatagggtag
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