Orientia tsutsugamushi Ikeda: OTT_1187
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Entry
OTT_1187 CDS
T00705
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
ott
Orientia tsutsugamushi Ikeda
Pathway
ott03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ott00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
OTT_1187 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ott03011
]
OTT_1187 (rpsA)
Ribosome [BR:
ott03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
OTT_1187 (rpsA)
Bacteria
OTT_1187 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_RRP4
RNase_II_C_S1
S1CSD-TOTE-1
Motif
Other DBs
NCBI-ProteinID:
BAG40645
UniProt:
B3CTE8
LinkDB
All DBs
Position
1211233..1212708
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AA seq
491 aa
AA seq
DB search
MTQINLKQRFIPTISSKSIVQENFEELFNKITNEQIKVGTVVKGKVVEIDDEVVIVDIKL
KNEGRIPLSEFKLASDVPIPQIGDLVDVYVEKIEGRNGCTILSREKALREEAWSILEEAQ
KNGSLVDGVIFGKVKGGFTVDLSGVVAFLPGSQVDVRRPIKNITPLMNIVQPFQILKMDK
KLGNIVVSRRAVLEEARAGIRQEVLSKIHVGMILNGVVKSIVYYGAFIELSGSDELTFDV
KVDGLLHSINILWRKINHPGEELQIGQQVRVVVIGIDIATGQISLGMKQLSANPWDDIEN
SLQIGDIKVGKVKSIAEYGAFIEVTKDLEGLCHSGHLGWEKINQNPKKSLTIGQEVVFKI
LDIDKERHRISLSLKLCKPNPWEVLAEKYQVGTVIRAPLRNITNFGMFVALSVTTNAVKY
EIDGKEYEIGEMTYQIDGMIHESDILKHGDTNSNSLKNYTKGDEIECMVLAVDVEKERIN
LGIKQLADYKR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaataaatctaaaacaaagattcattcctactatttctagtaaatctatagtt
caagagaattttgaggaactatttaataaaataactaatgagcaaataaaagttggtact
gttgttaagggcaaggttgtagagatagatgatgaagtagttatagtagatattaaatta
aaaaatgaaggtagaattcctctatcagaatttaagcttgctagcgatgttcctatacct
cagataggagatctagttgatgtatatgttgaaaaaatcgaaggtcgtaatggttgcaca
attttaagccgtgaaaaagctttaagagaagaagcttggtctatacttgaggaagcccaa
aaaaatggctcactagtagatggtgttatctttggtaaagtaaaaggcggttttactgta
gatctttctggggttgttgcatttttgcctggaagtcaagttgacgtacggcgtcctatt
aaaaatattactccattaatgaatatagtacagccgtttcaaattttaaaaatggataag
aagctaggtaatattgtagtatcaagacgagctgttttagaggaagctagggctggaata
cgacaagaggtattatctaaaatacatgttggcatgatactaaatggagttgtaaagagt
atcgtttattatggagcgtttattgagcttagtggatctgatgagttaacatttgatgta
aaagtagatggattattgcactctataaatattttatggcgtaagattaatcatcctggt
gaagagttacagattggacagcaagtaagagttgtagttattggtattgatatagcaact
ggtcaaatttcacttggtatgaagcaattaagtgctaatccatgggatgatattgaaaac
agcttgcaaataggggatattaaagttggcaaggtaaaaagtattgcagaatatggtgca
tttattgaggtaaccaaagatctagaggggttatgccattcaggacatcttggttgggaa
aaaatcaatcaaaatcctaaaaaatcattaactattggtcaagaagttgtatttaaaatc
ttggatattgataaagaaagacatagaatttcattaagcttaaagttatgtaagcctaat
ccatgggaggttttagctgaaaaatatcaagttggaactgttattagagctccgttacgt
aatataactaattttggaatgtttgtagcgttatctgttactactaatgcagtaaaatat
gaaattgatggtaaggaatatgaaattggtgaaatgacctatcaaatagatggaatgata
catgaatctgatattcttaaacatggagatacaaatagcaattcactaaaaaattatact
aagggtgatgaaatagagtgtatggttcttgcagttgatgtagaaaaggaaagaattaat
ttaggcattaaacaactagcggattataaaagataa
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