Orientia tsutsugamushi Ikeda: OTT_1296
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Entry
OTT_1296 CDS
T00705
Symbol
rpoH
Name
(GenBank) heat shock sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ott
Orientia tsutsugamushi Ikeda
Brite
KEGG Orthology (KO) [BR:
ott00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ott03021
]
OTT_1296 (rpoH)
Transcription machinery [BR:
ott03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OTT_1296 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
ANAPC3
PucR
DUF3431
ANTAR
Motif
Other DBs
NCBI-ProteinID:
BAG40754
UniProt:
B3CTQ7
LinkDB
All DBs
Position
1313831..1314730
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AA seq
299 aa
AA seq
DB search
MDNEIDNLPISASDTDNGFYIYLQKINRIPSLTAEEEYMLAKSYFEQNNLKAAHSLVKSH
LKLVAKIALSYRGYGLPVVDLVSEGNIGLLQAVKKYNPELGFRLSTYAIWWIKAAIQDYI
LRSWSLVKLGTTAAQKKLFFNLGKIKNKITKLHARAINSSDYKQIADESGVSIAEVSEVN
QRLSNSDLSLNTPISYHEDDATELVELVPEHRPNQEIILANQQDLNLKQEVLQNALQTLT
QRELYIIRARKLQDEPDTLEKLSLHFNVSKERIRQIESKAFEKLQQYAMNTKHKLLHFV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggataatgaaatagataatttaccaatatcagcttcagatacagataatggattttat
atttacttacaaaagattaatagaatcccttctttgactgctgaggaggaatatatgctt
gcaaagtcttattttgagcaaaataacttaaaagcagcgcattcattagtcaaaagccat
cttaagctggttgctaaaatagctttgtcttatcgtggctatggtcttccagtagttgat
ttagtttccgaggggaatatagggttactacaagcagtaaaaaaatataatcctgaactt
ggctttaggttgtctacatatgcaatttggtggattaaagctgcaatacaggattatatt
ttacgatcatggtctctagtaaaattaggaacaacagcagctcaaaaaaaactgtttttt
aatttaggtaaaattaaaaataaaattactaagctgcatgcaagagctattaattcatct
gattataagcaaattgctgatgagtcaggagtatcaatagcagaagtatcagaagttaat
caacgcttatcaaactccgatctatcgcttaatactcctattagttatcacgaagatgat
gctactgaattagttgaattggtaccagagcatagaccaaatcaagaaataattttagct
aatcagcaggatttaaacttaaaacaagaagttttgcaaaatgctttacaaactcttaca
caaagagaattatatattattcgtgcacgaaagctacaagatgagcctgatacgctagaa
aaattaagtttgcactttaatgtctccaaggagaggattcgccagatagaaagcaaagct
tttgagaagctacagcagtatgcaatgaacactaagcataagttattacattttgtttag
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