Orientia tsutsugamushi Ikeda: OTT_1325
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Entry
OTT_1325 CDS
T00705
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ott
Orientia tsutsugamushi Ikeda
Brite
KEGG Orthology (KO) [BR:
ott00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ott03032
]
OTT_1325 (topA)
03400 DNA repair and recombination proteins [BR:
ott03400
]
OTT_1325 (topA)
Enzymes [BR:
ott01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OTT_1325 (topA)
DNA replication proteins [BR:
ott03032
]
Prokaryotic type
DNA Topoisomerases
OTT_1325 (topA)
DNA repair and recombination proteins [BR:
ott03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OTT_1325 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BAG40783
UniProt:
B3CTT6
LinkDB
All DBs
Position
complement(1345500..1347866)
Genome browser
AA seq
788 aa
AA seq
DB search
MKLLIVESPAKAKTINKYLGSDFQVVASYGHVRDLLAKAGSVLPEQDFLIKYEINPKSTR
HIKTICDLAKKSECIYLATDPDREGESISWHIVEVLKEKKIFANFKRIIFNEITKKAIGD
ALQQPRDINLNLVNAQQARRSLDYLVGFSLSPLLWRKLPGCKSAGRVQSVGLRLICEREE
EISKFISQEYWNIHIDMISNKDEIVTAKLIEFDGNKLEKFSITNQSQAQDIVKNIENQQF
KVIDITRKQRKKSPPPPFITSSLQQEAAGKLGFTAKKTMTIAQKLYEGIDLNNESTALIT
YMRTDSVMLSKDFIDETRNFISSSFGSNYLPKQIRAFKSKVKNAQEAHEAIRPININLTP
ELLLNKIEKDYLKLYELIWQRTVACQMENVILNLESINFASFNQLHVAKATGSTIAFDGF
YKVYKEINDEEENKKLLPNLSQNEVMQVKNILPKQHFTEPPPRYSEATLVKTLEDLGIGR
PSTYATIISVLQERDYVILDQKRFIPQNKGRLVTAFLTAFFKKYVEYDFTAKLEDQLDSI
AKGMIEWQEILKNFWTGFNNNVQEIEQYKITDIIPQIETLLSNFLFPAQNDETDHKLCTL
CKVGKLSLKLSKYGAFLACDNYPSCNFTRNIAAAFENNDNLPKGKNNKAIGYSDDMQKTI
YLKEGPFGWYIQAGEDSTNKNDKPKRVPISVISSSPQDITLETAVKLLALPKVIGLNPNT
NKEITVAVGRYGPYLKHDGKFISIPKNYDYLNLSINDCIKIITSSSSQLRKAKKDAPTNS
DKVAKSKS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaaattattaattgtagaatctccagcaaaggctaaaaccataaataaatatttaggt
tcagactttcaagtagtagcatcttatgggcacgtaagagatctacttgcaaaagcagga
tcagtactgccagagcaagattttttaattaaatacgaaattaatccaaaatccactcga
catattaaaaccatttgcgatcttgctaaaaaatcagaatgtatttatttagcaactgac
cctgatcgagaaggagaatcaatttcttggcatattgtagaagtactaaaagaaaaaaag
atttttgctaattttaaaagaataatatttaatgaaattactaaaaaagctataggtgat
gcactacaacagccacgcgatattaatttaaacttagtaaatgctcaacaagctagacga
tcattagactatctagtaggatttagcctttcccctttgctatggcgtaaattaccaggc
tgtaagtcagctggacgagtacaatccgtaggactcaggctaatttgtgaacgcgaagaa
gaaatatcaaaatttatatctcaagaatattggaatattcacattgatatgattagcaac
aaagatgaaatagtaacagcgaaactaatagaatttgatggcaataaattagaaaagttc
tccatcactaatcaatcccaagctcaagatatcgttaagaatattgaaaatcaacaattc
aaagttattgacattaccagaaaacaaagaaaaaaatcccctcctccaccatttattact
tcttctttacaacaagaagctgctggtaaattaggatttacagccaaaaaaactatgact
attgctcaaaagctttatgaaggaattgatctaaataatgaatctactgctctaattacc
tatatgagaactgatagtgtaatgctgtctaaagatttcattgatgaaactagaaacttt
attagttcaagctttggtagtaattatttacctaaacaaattagagcatttaaatcaaaa
gttaaaaatgcacaagaagctcatgaagctattagacctattaacattaacttaacacca
gagttgctattaaacaaaattgaaaaagattatctaaaattatatgaattaatttggcaa
cgtacagtagcttgccaaatggaaaatgtaattctaaacttagaatcaattaattttgct
agttttaatcaactacatgtagctaaagctactggttcaaccatagcttttgatggtttc
tataaagtttacaaagaaattaatgacgaagaagaaaataaaaaactactacctaatcta
agccaaaatgaagtgatgcaagtaaaaaatattttgccaaaacaacattttactgaacct
cctcctcgttattctgaggctacactagtcaaaacccttgaagatcttggaattggtaga
ccatcaacgtacgccacaattatatctgtattacaagaaagagattatgttattctagac
caaaaacgtttcataccacaaaataaaggaaggttagttacagcattcttaactgcattt
tttaaaaagtatgttgaatatgactttacagctaagcttgaggaccaacttgatagcatt
gctaaaggaatgattgaatggcaagaaatactcaaaaacttttggactggatttaataat
aacgtacaagaaatagagcaatataaaattacagatataatacctcagatagaaacatta
ttatctaactttctatttccagcacaaaatgatgaaactgatcataaattgtgtactctc
tgcaaagtaggtaagttatcgttaaaactaagcaaatatggagcatttttagcctgtgat
aattatcctagctgtaattttactcgcaatattgcagctgcttttgaaaataatgataat
ctacctaaaggtaaaaataataaagcaattggttactcagatgatatgcaaaaaacaata
taccttaaagaaggaccttttggttggtatattcaagcaggagaagatagtactaataaa
aatgataagccaaaaagagtgccaatatctgtaattagcagtagtccacaggatataaca
ttagaaacagcagtaaaattgcttgcattacctaaagtaattggattaaatcccaatact
aacaaagaaatcactgtagctgttggcagatatggtccatacttgaaacacgatggaaag
tttatttcaatacccaaaaattatgattatcttaatttatcaattaatgactgcataaaa
ataattacaagctcttcatctcaattacgcaaagccaaaaaagatgcacctactaactct
gataaagttgctaaatcaaaatcttaa
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