Orientia tsutsugamushi Ikeda: OTT_1360
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Entry
OTT_1360 CDS
T00705
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ott
Orientia tsutsugamushi Ikeda
Pathway
ott03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ott00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OTT_1360 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ott03019
]
OTT_1360 (pnp)
03016 Transfer RNA biogenesis [BR:
ott03016
]
OTT_1360 (pnp)
Enzymes [BR:
ott01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OTT_1360 (pnp)
Messenger RNA biogenesis [BR:
ott03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OTT_1360 (pnp)
Transfer RNA biogenesis [BR:
ott03016
]
Prokaryotic type
tRNA degradation factors
OTT_1360 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
OB_RRP5_4th
S1_RRP5
KH_11
Motif
Other DBs
NCBI-ProteinID:
BAG40818
UniProt:
B3CTX1
LinkDB
All DBs
Position
complement(1388283..1390493)
Genome browser
AA seq
736 aa
AA seq
DB search
MFNEILKKVDWHGNMLSLSTGKIARNADGAVLASMGNTSVLCTVVFDKNTKKDIDFFPLG
VYYREMAYAAGKIPGGFIKKEGKFSEYEVLVSRLIDRSIRPLFDSNFRNDTQVICTVMSY
DPRYSPDILAIIGSSAALAISGIPIVKPIGAARVGIVNDEFILNPVIHDNTGVNELDLVV
AATFDSVTMIEAQACEIDEEKMLAAIEFGYKSLKPVINAIEEIKSSIRKDIFEVTARPHL
RYNDEILKHFSSDIKSALLLQTKNERNQQLQLIQQKVVDYFSSEANDDDAILNIEKALDD
VKSKIFRDLVLQDKTRIGNRAIDEIRPIICEAGLFNTVHGSALFTRGDTQSLATITLGSS
TDEQIVEQLNKCERQNFLLDYIFLPYSVGEISPLRAASRREIGHGWLAKKAIQLVIPSKD
VFPYTIRIVSEITQSDGSSSMATVCSASLSLMEAGVPIKTHVAGIAMGLVLGEGNKFEIL
SDISGCEDHLGDMDFKVASTKNGITALQLDIKVQGINLSMIESTFRQAKIGINHILNVMN
NTISCPKSELSTYAPMVQTLEIQKEKIRDVIGLGGKVIKELCKTFDVEIDISENGEVKVW
GNVGENVKKAVQSIENIVFVPQIGDIFDGEVVKVIESGAFIKYVTGRDGFVHISEINDTH
IKDINAHVKLGDKVKVKIIGIDHKNRVKLTLRTDKEHCKNKNEQYNDITTTTGSVKKKIK
IAPKEAAVISNRKYFD
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgagatactaaaaaaagttgattggcatggtaatatgctatctctaagtact
ggcaagatagcgcgtaatgctgacggagcagttttggcatcaatgggcaacacgtcagta
ttgtgtacagtagtttttgataaaaacacaaagaaggatattgatttttttccgctaggt
gtttattacagagaaatggcctatgccgctggtaaaattccaggaggctttataaaaaaa
gagggcaagttttctgaatatgaagtattagtatcaagattaatagaccgttctattcgt
ccactttttgattctaactttcgtaatgatactcaggttatttgcacagtgatgtcatat
gatccaagatatagccctgatattttagcaattattggcagttctgctgcattagcaatt
tctggaattccaatcgtaaaacctattggagctgctagagttggaatagttaatgatgaa
tttatattaaatcctgtaattcacgacaatacaggagtcaatgagcttgatttagtggtt
gcagctacttttgattcagttactatgatagaggctcaagcttgtgaaattgatgaagaa
aaaatgttagctgctatagagtttggatataaatcactaaaacctgtaattaacgctatt
gaggaaataaaatcaagcattagaaaggatatttttgaagttacagctaggccacatcta
aggtataatgatgaaatacttaagcattttagctctgatattaaatcagcacttttacta
caaactaagaatgaacgtaatcaacagctgcaattaatacagcaaaaagttgttgattat
ttttccagtgaagctaatgatgatgatgctattttaaatatagaaaaagctttagatgat
gtaaaatctaaaatttttagagatttagtattacaagacaaaaccagaattggaaataga
gctatagatgaaattaggcctattatttgtgaagccggtttatttaatacagtgcatgga
tctgcactatttactcgtggtgatactcaaagcttagcaacaattacattaggtagtagt
actgacgaacaaatagttgagcagttaaataagtgtgaaaggcagaattttttactagat
tatatctttttaccttattcagttggcgaaatttcgccactaagagctgctagtagaaga
gaaataggccatggctggttagctaaaaaagctattcaacttgttattcctagcaaagat
gtatttccatatactattagaatcgtatcagaaattactcaatctgatggatcttcttca
atggcaacagtatgtagcgcttcgcttagcttaatggaagctggagttccaataaaaaca
catgttgcaggtattgctatggggctagttttaggtgagggcaataagtttgagatttta
tctgatatatctggttgcgaagatcatttaggagatatggattttaaagtagcaagtact
aaaaacggtattacagctttgcaattagatattaaagttcaaggaattaatttatctatg
atcgaaagcacctttcgacaagctaaaattggtataaatcatatattaaatgttatgaat
aatactattagttgccctaaatcagaactaagtacatatgcaccaatggttcaaacatta
gaaattcaaaaagaaaaaattcgtgatgttattggattaggcggtaaagttattaaagag
ctttgcaaaacttttgatgttgaaattgatattagtgaaaacggagaagttaaggtttgg
ggaaatgtaggtgaaaatgtaaaaaaagcagtacaaagtattgaaaatattgtgttcgtt
ccacaaataggtgatatctttgatggtgaagtagttaaggttattgaatctggagcattt
ataaaatatgtgactggtcgagatggattcgtgcatattagcgaaattaatgatacacat
ataaaagatattaatgcacacgtaaaattaggagacaaggtaaaagtcaaaattattgga
attgatcataagaatcgtgttaaattaactttgagaacagataaagaacattgcaagaac
aaaaatgagcagtataatgatattactacaacaacaggcagtgtaaagaaaaagattaaa
atcgctcccaaagaagcagcagtaatttctaataggaaatactttgattaa
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