Orientia tsutsugamushi Ikeda: OTT_1542
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Entry
OTT_1542 CDS
T00705
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase, DNA photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ott
Orientia tsutsugamushi Ikeda
Brite
KEGG Orthology (KO) [BR:
ott00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ott03400
]
OTT_1542 (phrB)
Enzymes [BR:
ott01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
OTT_1542 (phrB)
DNA repair and recombination proteins [BR:
ott03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
OTT_1542 (phrB)
Prokaryotic type
OTT_1542 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAG41000
UniProt:
B3CUF3
LinkDB
All DBs
Position
1570996..1572513
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AA seq
505 aa
AA seq
DB search
MNMKKISIVWLRRNLRLEDNKPFAEALKSSKKIIPIFIFDTTILQNFSNPLDRRLSFLAN
TIYNLNSELQELEGNLLVLYGNSVEIIPKLIEKLNIQTIYADEEYDPENVIRDQKITNLL
EFNGKSKLELVCDHLLLKPGSIVTHKKQYYMRYNPYNTAFKQYLRKNCSCIERSNYRLDH
RLVSLESIDLSSLNLKIINLNHGASEILNQIGYTYQKDNIWQPIKAKNILNNFIQNNITS
YRTNNTNQNLLYLNNSSTISPYLRFGLVSIRECFSKAIAADSKALITDEAIGKTEKEKGW
IDGLIHREFYASLLFRFPNTVSEEFQDKYRNNIPWEKDLEIYCKFTEGKTGYPMIDASIK
QLLRDGWMHNLARTIVANFFTKYLLLDWRLGEHFFSQYLMDYELASNVGSWQWAASCGTD
MEHFVRMFCPFAQGRKFDHEAKYIKKYLPNLENVSAKVIHDVHFSKKYPNYLTPIIDYQL
SKDKSSNFFKQIKKLKNQHQTLLSK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaaaaagatatctatagtatggctacgtcgtaacttaaggctagaagataat
aagccttttgcagaagcattaaaatcttcaaagaaaatcatacctatttttatttttgat
actactattctccaaaatttttctaatcctttagatcgtcgactatcttttttagcaaat
actatttacaacctaaatagcgaattacaagaattagaaggtaacctgttggtattatat
ggtaattcagtggaaatcattcctaagcttatagagaaattgaatattcaaacaatttat
gctgatgaggagtatgatccagagaatgttatccgtgatcaaaaaataaccaatctttta
gagtttaacggaaaatctaaattggaactagtttgtgatcatttattgctaaagcctggt
tctattgtaacacacaaaaagcagtattatatgagatataatccatataatactgctttt
aaacaatatttaaggaagaattgttcatgtatagaaagatctaattatagattagatcat
agattagtatcattggagagcatagatttatctagtttaaatttaaaaattattaacctt
aaccatggtgcaagtgaaatattaaatcaaattggttatacttaccaaaaagataatatt
tggcagccaataaaggcaaaaaatatcttgaataattttattcagaacaacataactagt
tatagaactaacaatactaaccaaaaccttttatatcttaacaatagtagtactatttca
ccttatttaagatttggattagtctcaataagagaatgtttttctaaggctatagcagct
gatagcaaggctttaatcacagatgaagctataggtaaaactgagaaagaaaaaggctgg
atcgatggattaattcacagagaattctatgcaagtcttctttttagatttccaaatact
gtaagtgaggaatttcaagataaataccgtaataatataccttgggagaaggatttagaa
atttattgtaaatttactgaaggcaaaactggttatccaatgatagatgcatcaattaag
caattattaagagatggttggatgcataatcttgcacgtactattgttgcaaatttcttc
actaagtatttactgcttgattggcgtttgggagagcattttttttcacaatatttaatg
gattatgaacttgcttcaaatgtgggtagttggcaatgggctgcatcatgtggtaccgat
atggaacattttgtccgtatgttttgtccttttgctcaaggaagaaaatttgatcacgaa
gcaaagtatataaaaaaatacttacctaaccttgaaaatgtttctgctaaggttattcat
gacgtgcatttttcaaaaaaatatcctaattacctaactccaataatagattatcaatta
tcaaaagataaatctagtaacttttttaaacagataaaaaagttaaagaaccagcatcaa
actttacttagcaagtaa
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