Orientia tsutsugamushi Ikeda: OTT_1863
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Entry
OTT_1863 CDS
T00705
Symbol
holB
Name
(GenBank) DNA polymerase III delta subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ott
Orientia tsutsugamushi Ikeda
Pathway
ott03030
DNA replication
ott03430
Mismatch repair
ott03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ott00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OTT_1863 (holB)
03430 Mismatch repair
OTT_1863 (holB)
03440 Homologous recombination
OTT_1863 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ott03032
]
OTT_1863 (holB)
03400 DNA repair and recombination proteins [BR:
ott03400
]
OTT_1863 (holB)
Enzymes [BR:
ott01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OTT_1863 (holB)
DNA replication proteins [BR:
ott03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OTT_1863 (holB)
DNA repair and recombination proteins [BR:
ott03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OTT_1863 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DUF5901
Motif
Other DBs
NCBI-ProteinID:
BAG41321
UniProt:
B3CVC4
LinkDB
All DBs
Position
complement(1897868..1898740)
Genome browser
AA seq
290 aa
AA seq
DB search
MLNTFIKNWQNNIFANAWIINTDNSDSALSILLKFCNKILNHHNNAVFHQDMILVKRRSM
NGNSNDKFITVDQIRDMLFFLNKTPIKSAIKIAIIYEAEYMNINSANCCLKILEDPPINR
YIFLITTKFASILSTIKSRCHLLTQKFDHCNNTALAAYSQVEYQNLINMLNTQTTKIQLE
FIQKIKSIQLNSQEWYKFGQACMILIVKSIRYKVGFKEAKDHSNNDCAIAEMRVIEKISN
TNSTEELVQKYDKVSNILYNTNNVDLDVGNATLLILSLMQNQLNFHENNN
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatactttcataaaaaattggcaaaataacatttttgccaatgcctggataatt
aatactgataactctgatagtgctttgagtattttactgaaattttgcaataaaatactc
aatcaccataataatgctgtttttcaccaagatatgattttagttaaacgtaggtctatg
aatggtaatagcaatgataaatttattactgttgatcaaatacgtgatatgctatttttt
ctgaataaaacaccgataaaatcagctataaaaattgcaattatatacgaagcagaatat
atgaatattaattctgctaattgttgtcttaaaatacttgaagatccacctattaatcgc
tacattttcttaattactactaaatttgcaagcatactttctacaattaaatctcgttgc
catttacttactcaaaaatttgatcattgtaataataccgcattagcagcatattctcaa
gttgaataccaaaatctaattaatatgcttaatacccaaactacaaaaattcaattagaa
tttattcaaaaaataaaatctatacaactcaattcacaagaatggtataaatttggtcaa
gcttgcatgatattaattgtaaaatctatcagatataaagttggctttaaggaagctaaa
gatcatagcaataatgattgcgccattgctgaaatgagagttattgaaaaaatcagcaat
actaattcaactgaggagctagttcaaaaatatgacaaggtaagtaatattctatacaac
actaataatgttgacttagatgttggtaatgctacgttattaatattatcactaatgcaa
aaccaattgaattttcatgaaaataacaattaa
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