Onthophagus taurus (bull-headed dung beetle): 111414492
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Entry
111414492 CDS
T07420
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
otu
Onthophagus taurus (bull-headed dung beetle)
Pathway
otu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111414492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otu03019
]
111414492
Messenger RNA biogenesis [BR:
otu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
111414492
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
CSD2
Rrp44_S1
OB_HELZ2
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
111414492
NCBI-ProteinID:
XP_022901619
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All DBs
Position
1:complement(33054730..33062879)
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AA seq
950 aa
AA seq
DB search
MFTTKTFVRKNKLGNYIKHTREHYIRDDIFCGFKFCETCSHTETSLSKDFQVKSSLIKKN
HYLILDTNVILDQIDVLEEDVIGNVIILNTVLNEVKHRNLPTYRRLMSIIDNSKRHFYVF
INDFNKETYLQQEKGETPNDYNDRCIRKACSWYIQHIPWETFVFISDDKANRSIAKNEDI
LSYSMSKYVSSLTGKEYLSDKLSKKDFHQEENAENVYPPHFSITSIHQGIKESTLHQGTF
HASRDNFLEATVTIDAFEDPVIVRGRVGLNRAVDGDLVAIEILKKEDWIAPSDFIFEDEA
GNENALEDVIEKEQKLSQVGKKGDIKPTGRVVGIIKRKWRQYCGILQDGLDGVYQLFIPA
EKKIPKIRIETRQAEFLRTQKLIVAIDSWPRTSRYPNGHFVRALGKIGDQKTENEVVLLE
HDVPHHQFSEEVLNCLPKLPWVITEEDVNKRVDLRHINICSVDPPGCTDIDDALHCRQLE
NGHFEVGVHIADVSHFIRPGTALDKEAASRATTVYLVNNRIDMVPDLLSSNLCSLRGGEE
RFAFSCVWELDKKANIINTRFHKSIIKSKKAMTYEEAQITIDDGSQTDELAQSLRNLNKL
AKFLKKKRLEKGALVLASPEIKIMMDTETHDPIDVEVKKLFETNSMVEEFMLLANISVAE
KILEDFPDCAMLRRHPEPPPINFDPVIKAGKHLGFEIRIDSGKHLADSLDAAVRADNPYL
NTMLRILTTRCMMQAVYFASGMFTKAEFFHYGLAVPLYTHFTSPIRRYADIIVHRLLAVS
VGSDSTYPDLLDKRKTSDLCQNLNYRNRMAQYAGRASIAFNTHLFFRGKIEDEEGYVLYV
RKNALQILIPKFGLESTLYLGKKGEEKLSIFEYNEEDHTQKCGDIVFHAFDPVTVRISLD
SNNIQHEKFVLQLVKPFIEGFSVAPLKPGDDQEDLRASPPKRRKKMKKNR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtttactacaaagacttttgtacgaaaaaacaaacttggaaattacataaagcataca
agggaacattacatccgagatgatatcttttgcggctttaaattctgtgaaacatgttcc
catacagaaactagtctctcaaaagacttccaggttaaatcttctttaataaaaaagaat
cattatcttattttggatactaatgtaattttagaccagattgatgttttagaagaagat
gtaattggaaacgtaattatattaaatacagtcttaaatgaggttaaacatcgaaattta
ccaacttatcgtcggctaatgagcataattgataattcgaaacgacatttttatgtgttt
ataaatgattttaataaagaaacttatttgcaacaagaaaaaggggaaacacccaatgat
tataacgatagatgcattagaaaagcttgttcttggtatattcaacatattccctgggaa
acttttgtgtttatttctgatgacaaagcaaataggagtattgcaaaaaatgaagatatt
ttatcctactcaatgtcaaaatatgtaagtagtttaactggaaaagaatatctttctgat
aagctctcaaaaaaagatttccaccaagaagaaaatgctgaaaatgtttatccacctcat
ttctccataacatcaattcaccaaggcatcaaagaatccactttacatcaaggaacattc
catgcgtctcgagataatttcttagaagccaccgttacaattgatgcttttgaggacccg
gttatcgtacgaggaagagttggtttaaacagagctgtagacggggatttggttgcgatt
gaaatcttgaaaaaagaggattggatcgctccgagtgattttatttttgaagacgaagct
ggaaatgaaaacgcacttgaagatgtcatcgagaaagaacagaaactttctcaagttggg
aaaaaaggtgatattaaaccgacaggacgagtcgttggaattatcaagagaaaatggaga
caatattgtgggattcttcaagatgggcttgatggtgtttatcaacttttcattccagct
gaaaaaaagattcctaagattcgtattgagacgagacaagctgagtttttgaggactcaa
aagttaattgttgctattgatagttggccaaggacatctcgatatccaaatggtcatttt
gttagagctttgggtaaaattggagatcaaaaaactgaaaatgaagttgttttattagaa
catgatgtccctcaccatcaattttccgaagaagttttaaattgtctcccaaaacttcct
tgggttataacggaagaggatgttaataaacgcgttgatttacgtcacataaatatttgt
tcagttgatccaccaggatgtacagatattgatgacgctttgcattgccgacaattagaa
aacggtcatttcgaagttggtgttcatatcgctgacgtatctcattttattcgaccggga
actgctttggataaagaagcagcttctcgcgcgacgactgtttatcttgtaaataacaga
atcgacatggttcctgatttattaagttcaaatttatgctcgttaagaggtggggaagaa
cgtttcgcgttttcttgcgtttgggaattagataaaaaagccaacattattaatactcgt
tttcataaaagtataattaaatcaaaaaaggcaatgacgtatgaagaagcccaaattaca
attgatgatggttctcaaaccgatgagttggcccaatctttaagaaatttaaataaatta
gcgaagtttttaaaaaagaaacgattagaaaagggagctttagtgttggcatctcctgaa
ataaagataatgatggatacagaaactcacgatccaatcgatgtagaagttaaaaaatta
tttgaaactaactcgatggttgaagaatttatgttattagctaatattagtgtagctgaa
aaaattcttgaagattttccagattgcgcaatgttaagaagacatccagaaccaccacca
attaattttgatcctgtcataaaagctggaaaacatttaggttttgaaattcgtattgat
tctggaaaacatttagcagattctttagatgcagctgtaagagctgataatccatactta
aatacaatgttaagaatacttacaacaagatgtatgatgcaagctgtttattttgcaagt
ggaatgttcacaaaagccgaattttttcattacggtttagctgttccgctttatacgcat
tttacttcaccaattcgaagatatgccgatataatagtccatcgacttcttgcagtttca
gtgggttctgactcaacatatcctgatttattagataaaagaaaaactagcgacttgtgt
caaaatttaaattacaggaatcgaatggctcaatatgctggacgagcttccatagctttt
aacacccacttattttttcgtggaaaaattgaagatgaagaaggttacgttttgtacgtt
cgtaaaaacgctttacaaattttaattccaaaattcggcttggaatcgacgctttatctg
gggaaaaagggtgaagagaaattaagcattttcgaatacaacgaggaagatcatacacaa
aaatgtggcgatattgtttttcacgctttcgatccggttacggttcgaataagtttggat
tcgaataatattcagcacgaaaaattcgttcttcagttggttaaaccatttattgaaggg
ttcagtgtggcacctttaaaaccaggagatgatcaagaagatttaagggctagtccacct
aaaaggcggaagaaaatgaaaaaaaatcgataa
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