Onthophagus taurus (bull-headed dung beetle): 111417118
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Entry
111417118 CDS
T07420
Name
(RefSeq) exosome complex component RRP4 isoform X1
KO
K03679
exosome complex component RRP4
Organism
otu
Onthophagus taurus (bull-headed dung beetle)
Pathway
otu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111417118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otu03019
]
111417118
Messenger RNA biogenesis [BR:
otu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111417118
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
111417118
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
111417118
NCBI-ProteinID:
XP_022905078
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Position
3:complement(2491506..2492738)
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AA seq
296 aa
AA seq
DB search
MSEKIHIRLATERVNFTVVPGGRTPKIFTPGQIITQQNEFMRGHGTYEDDGYLKASVAGV
KEEVNKLISIRPLQSRYNGVIGDVVVGRITEVQQKRWKVDTNSRLDSMLLLSSVNLPGGE
LRRRSAEDEHMMRKYLQEGDLISAEVQNVFSDGSLSLHTRSLKYGKLSQGILVKVSPTLI
KRSKTRFHNLPIGASIIFGNNGFVWISPIVNTEEAGVGGFTQNLEEVVSRTERETIARIR
NCILALAQCKMMLYDTSVLYAYEESLKYNVVDLLVPEAIIDVGILTRQRISMVAES
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaaattcatattcgtttagctactgaaagagtgaattttacggttgttcca
ggtggaagaactccaaaaatatttactcccggtcaaataataactcaacaaaacgaattt
atgcgaggacatggtacatatgaagatgatggttatttaaaagcgtctgtagctggggta
aaagaagaagtaaataaattaatttcaatccgccccttacaaagtcgttataacggtgtg
attggagatgttgttgttgggagaataacagaggttcaacaaaaacgttggaaagttgat
acaaactccagattagattctatgttacttttatcgtcagttaacctccccggtggtgaa
ttaagacgaagatctgctgaagatgaacacatgatgcggaaataccttcaagaaggtgat
ttaattagtgcagaagtacaaaatgttttttctgatggaagtttatctttacacacaaga
agtttgaagtatggaaaattatctcaaggtattttagtgaaagtttctccaacattaatt
aaaagaagtaaaacaagatttcataacctcccgattggggctagtattatttttgggaat
aatggatttgtttggattagtcctattgtaaatacagaagaggcaggtgtggggggattc
actcaaaatttggaggaggttgtttcgagaactgaaagggagacaattgctaggataaga
aattgtattttagctttggctcaatgtaaaatgatgctttatgatacaagcgttttgtat
gcttatgaagaatcgttaaagtataatgtcgttgatttattggtaccggaagcaatcatc
gatgtgggtattttaacacgtcaacgaataagtatggttgcagaaagttaa
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