Onthophagus taurus (bull-headed dung beetle): 111417516
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Entry
111417516 CDS
T07420
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
otu
Onthophagus taurus (bull-headed dung beetle)
Brite
KEGG Orthology (KO) [BR:
otu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otu03041
]
111417516
Enzymes [BR:
otu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111417516
Spliceosome [BR:
otu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111417516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
Helicase_C
DEAD
R3H
YTH
OB_NTP_bind
Ank_2
Ank_5
Ank
Ank_3
Ank_4
HA2_N
ResIII
AAA_22
nSTAND3
ANK_LRRK2
ATPase
AAA_19
Cas3-like_C_2
AAA_29
AAA_23
AAA_11
Motif
Other DBs
NCBI-GeneID:
111417516
NCBI-ProteinID:
XP_071051522
LinkDB
All DBs
Position
3:complement(4423192..4444747)
Genome browser
AA seq
1322 aa
AA seq
DB search
MYANRRNRQSLQNEHTEDFRIGIDIIFRDFCADPGVTEFTFKPNLNNVERKYIHEKCRRL
GLKSKSKGKEPNRTLTMFKNVTSNQGTFEFKIGNDAKSKLKHFVMNNCNGPTATFNDLHQ
VVITNGSEGNLCFGDPPFVNAPSSYEFADFRSNLPVFEMRNFILETIERNSVTIISGETG
SGKTTQIPQYLLEYSNSLNKPCRIICTQPRRISTVAVAERVSIERGERVGETCGYQIKLD
CCLGPTTSLIYCTTGVLLRTLMSGFAVLKNVSYIIIDEIHERDKFTDFVLISLRECIKQF
PNLRLILMSATLDVELFENYFGNVAKVEVKGRTYPIQHYFLENILLELNYESEQMKLIQK
KNSKQNNEIAESNKINEVVVVDQDVLREMDEALLHYISIPNEENFIQVLHLILSEEVSVN
HQHSGTGYTLLMAAAANGHIEFVEKLLNLGADVSLKSQENCTAIDMAEQNCHNGVITLIR
NFEYMKRQVHNDVLSLYNQTILEDIIDHDLIVAIITHIHQTEIKNNMGVLVFLPGYEDIM
LQLEALSASPVGKFLKICVLHGSMMVNAQHDVFKRSQQRKVILSTNVAETSITIDDIAHV
IDTGKVKQKSYDSLNGTSTLETTWISIASLKQRAGRAGRCAPGKCYHIFSRTRYESLLIN
TIPEILTVPLHELCLQTKQLAPHGMKIADFLSKALEAPNTHVIVNAINDLVSLGALDSNE
SLTVLGSHLLRLCIEPHLGKMLIYSVIFKCLDPVLTVVATLTHKDPFVLPTKGSEKVEAG
KRKKSLTCGTFSDHMALLMVYQKWQEAKLTKTERKFYREYYVSPSCLDMISATRCHLVSL
LRQSGLVPVSSGIRNLVQFNRSWPIVKAALCAGLYPNVAFSHHNKVVSRNEKRVLMHSTS
CLRGTMEYSSGLWFVFDEMSKLGNLCNLKGVTAVTPLTIVLTAGSTLRFDPESSIMEIDD
SLNVNLGGDVVWKFRLALNDMIQRHVTQPSAKTTKFEMDLLGLFNYVLVGEESYFNLVQP
FEFGKRPRLPPGSNGYLHFNTNGESSNDFDPNMEPNFGDNVERNQQVLKRNFNGIPNDAD
DNHDHQSGSSKQYQPCLKTGSSKRQGCGPHSKQPELSHTSGNGANVPSTSQDGVFSDHRR
FGIPTNVLIDMTATGPISFGPSSIFYVIRPLELSNIMISLSQGTWNFAPQTERKVFRSFL
ENQKTFLLYNVRGTSEFQALAQLMSTNDGQYNTPAKINWLTTQGVTYDQIRGFFPNGINY
FVDGYQISREIGIKIATLMMERNDQPNVFARPILEFPERRSGGYKKPRWRGGWRGRRNNH
QW
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaaaccgtcgaaacagacagtccttgcagaacgagcacaccgaggattttcgc
attgggatcgacataattttcagagatttctgtgcagatcccggagtcaccgagttcaca
ttcaaaccgaatttgaataacgtcgagcggaaatacatccacgaaaagtgccgccgtttg
ggtttgaaatcaaaatcgaaaggaaaagagccgaatcgaaccttaacaatgtttaaaaac
gtaacttcaaatcaaggtacatttgaatttaaaattggtaacgacgctaagagtaaattg
aagcatttcgtgatgaataactgtaacgggcccactgctacgtttaacgaccttcatcag
gttgttattacgaatggaagcgagggtaatttatgctttggggatcccccttttgtcaat
gccccgagttcgtatgaatttgctgattttagaagtaatcttcccgtttttgaaatgaga
aattttattttggaaacgattgaaaggaattccgttacgattatttccggagaaaccggt
tcgggaaaaaccactcagattcctcaatacctcttggaatactcaaattcacttaataaa
ccttgtagaattatttgcacgcaaccaaggagaatttccaccgttgctgtagctgaaagg
gtttcaattgaaagaggggaacgagttggcgaaacttgtggttaccaaataaaattagat
tgttgcttaggacccacaacttcactaatttattgtacaaccggtgttttattgcgtaca
ttaatgagcggattcgccgttttgaagaatgtatcttacataataatcgacgaaatccac
gaaagagataaatttaccgatttcgttttgatcagtcttcgagaatgtataaaacaattc
ccgaatttgcgtttaatattaatgtcggctacgttggacgtggaattattcgagaattac
tttggaaacgtcgctaaagttgaagtcaaaggaagaacatatcccatacaacattacttc
ctcgaaaatatattacttgaattaaattatgagtctgaacagatgaaattgattcagaaa
aaaaatagcaaacaaaataatgaaatagccgaaagtaataaaattaatgaagttgtagta
gtcgatcaagatgtattacgagaaatggatgaagctttattgcattacatttcaattcct
aatgaagaaaatttcattcaagtcttacatcttattttatccgaagaagtttctgttaat
catcagcacagtggtacaggatacacgcttttgatggcagcggcggctaatggtcatatt
gaatttgttgaaaaattactaaatttaggtgctgatgtatcattaaaatcacaagaaaat
tgcacagctatcgatatggctgaacaaaactgccataacggcgttataaccctgattcga
aatttcgaatacatgaagagacaagttcacaatgacgttttaagtctgtacaatcaaacg
attcttgaagacataatcgaccacgatttaatcgttgcgatcatcacacatatccatcaa
actgagattaaaaacaatatgggggttctcgtattccttccgggttacgaagatatcatg
cttcaacttgaagctttatccgcatctcctgttgggaagtttctcaaaatttgcgtatta
cacggaagcatgatggttaatgcgcaacacgacgttttcaagcgatcacaacaacgcaaa
gtgattttatcaacgaatgttgctgaaacgagtattaccattgatgatattgcccatgtt
attgatactgggaaagttaaacagaaatcgtacgattcgttgaatggaacatctactttg
gaaactacatggattagtattgcttctttaaaacaaagagccgggagagctggaagatgc
gctccaggaaaatgttatcatatattttctaggacgcgttatgagtcgcttttaataaat
accataccggaaatactcacggtacctttacatgaactttgcctccaaaccaaacaactc
gccccacacgggatgaaaatagccgattttctttcaaaagccctcgaagccccaaacact
cacgttatagtgaatgcgataaacgatttagtttcgcttggagctctcgattctaacgaa
agcctaaccgttcttggttctcatttacttcgtctctgcatcgaaccccatttgggtaaa
atgctaatctattcggtaatttttaaatgcctcgatcccgttttaaccgtcgttgctact
ttgacccataaagatcctttcgttttaccaacgaaaggttccgaaaaagtcgaagctggg
aaacgaaagaaatcgttaacttgcgggacgttcagcgaccatatggccctgttaatggtt
taccaaaaatggcaagaagcgaaattaactaagacggaaagaaagttttatcgcgaatat
tacgttagtccgagttgtttggatatgatttcggcgacgagatgccatttggttagcttg
ttaaggcagtctggtttggtgccggtttccagtggcattaggaatttagtgcaatttaat
agaagttggccaattgttaaagcagcgctatgtgcggggttatatccgaatgttgcgttt
tcgcatcacaataaagtggtttcaagaaatgaaaagagggttttaatgcattcgacttcg
tgtcttcgaggaaccatggaatactcatcaggattgtggtttgtttttgatgaaatgtca
aaacttgggaatttgtgcaatttaaaaggagttactgctgttactccattaactattgtt
ttaaccgctggttcaactttgcgatttgatccggaatcgtcaataatggaaatcgatgat
tctttaaacgtgaacttgggtggcgatgtagtgtggaaatttcgacttgctttaaacgac
atgattcaacgtcacgtcacgcaaccatctgctaaaactacaaaattcgaaatggatctt
ctcggactttttaattatgttcttgtaggcgaagagtcttattttaatcttgttcaaccg
tttgaatttggaaaaaggccacgactcccaccaggaagcaatggatatctgcattttaac
acaaacggcgaatcatcgaacgacttcgatccaaatatggaacctaatttcggtgataat
gttgaaaggaatcagcaggttcttaaaagaaattttaatggaattccaaatgatgctgat
gataatcacgatcatcaaagtggtagttcgaaacaataccaaccttgtttgaaaactggt
tcttctaaacgacaaggttgcggaccacattcaaaacagcctgaattgagtcataccagc
gggaatggagcaaacgttccaagcacatctcaagatggtgtttttagcgatcatcgccgt
tttggtattccaacgaatgtgttgattgatatgacagcgactggtcctatatcgtttggt
ccgtcgtcaatattttatgttatccgtccattggaattgagcaatatcatgatcagttta
tcgcaaggaacttggaatttcgccccgcaaactgagcggaaggtttttaggagcttcttg
gaaaatcaaaagacttttcttctatacaacgttcggggaacttcggaatttcaagcttta
gcccaattaatgtctaccaatgacggtcaatataacacacctgccaaaattaattggtta
actacacaaggagttacatacgatcaaatcaggggattttttccaaatgggatcaattat
ttcgtggatgggtatcaaattagtagggagattggcataaaaatagccacgttgatgatg
gaacgtaacgatcaacctaacgttttcgcacgtccaattttggagtttcctgaaagaagg
agtggaggttataagaaaccacgttggagaggtggatggagaggaaggagaaataatcat
cagtggtaa
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integrated database retrieval system
