Onthophagus taurus (bull-headed dung beetle): 111419971
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Entry
111419971 CDS
T07420
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
otu
Onthophagus taurus (bull-headed dung beetle)
Pathway
otu03008
Ribosome biogenesis in eukaryotes
otu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111419971
09123 Folding, sorting and degradation
03018 RNA degradation
111419971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otu03021
]
111419971
03019 Messenger RNA biogenesis [BR:
otu03019
]
111419971
03009 Ribosome biogenesis [BR:
otu03009
]
111419971
03016 Transfer RNA biogenesis [BR:
otu03016
]
111419971
Transcription machinery [BR:
otu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111419971
Messenger RNA biogenesis [BR:
otu03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
111419971
Ribosome biogenesis [BR:
otu03009
]
Eukaryotic type
Pre-60S particles
RNases
111419971
Transfer RNA biogenesis [BR:
otu03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
111419971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
111419971
NCBI-ProteinID:
XP_022908631
LinkDB
All DBs
Position
7:complement(40765141..40771581)
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AA seq
956 aa
AA seq
DB search
MGVPAFFRWLSRKYPSVVVHCIEQKTTDLHGNPISVDSSEPNPNGVEFDNLYLDMNGIIH
PCTHPEDKPAPKTEDEMMIAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
ASKETVEKVNEMSRIRAELLLKGAKLPAEKAKEEHFDSNCITPGTPFMARLSECLHFYIH
DRLNKDPGWKGVKVILSDANVPGEGEHKIMDYIRKQRGQPDHDPNTQHCLCGADADLIML
GLATHEPNFTIIREEFKPNKPRPCDLCGQLGHEMKECMGLARLQDGEDEKTFGSEQEFIF
VRLNVLREYLERELQMPNLPFTYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRL
VGLYKDCVYKTHGYLTDSGDVNLERVQLIMFELGKAEDEIFKTRQQKELAFKARDKAKKR
RTDEYQQRQRKPDWAILENTQFAPIPLGQSKTILNPRQEAFQIRKAGMHSASDSLQSADN
KEALESMLRKDSNTSSPSTEENKGIKRKHDESDEEEEPNDEVRLWEDGFKDRYYESKFDV
TVENLEFRNAVALQYVRGLCWVLRYYYQGCASWKWYYPYHYAPFASDFINIAGLSTEFST
DSKPFLPLQQLMGVFPAASSRHIPQPWTHLMSDPDSPIIDFYPTDFKIDLNGKKFAWQGV
ALLPFVNETRLFKALEPYYSELTPEEVKRNIRGDDRLYVANGNRAHGIIKALYSERIDKD
FETAVKIDGMSGTVLLADDYVPIGETINSPIFGLKSIHDNKVCCIRYRDPKYNKEYIFPA
RKLKGAKTPPRVLKPQGMDDEGHRNWRPQIGMAPSTTRASLGRPGHRALNHYVPRGSSRG
GQDSRQNQSYRGGYQSYNQQNSYQQGGYYQNQRDQQKGSGNYYNSNYSQGRSNHGSGGGG
YNSYNSQSQQGYSQQRGGYNTNNSGRYQQQGNRDQHRRTGGPYKDRFEPYSSQYRR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgggagttccagcatttttcagatggcttagtagaaaatatccttctgtagtcgtacat
tgcatcgaacaaaaaacaactgatttacatggaaatccaattagtgttgattcttctgaa
cctaatccaaacggggtggaatttgataatttatacttggacatgaacggaataattcat
ccttgtactcatcccgaagacaaaccagcaccgaaaactgaggatgaaatgatgattgct
atttttgaatgtattgatcgtctgttcaggatcgtcagaccacgcaaattattgtatatg
gccattgatggggttgccccaagagctaaaatgaaccaacaacgttcaagacgttttcgc
gcatctaaagagaccgtagagaaagttaatgagatgagtcggattagagctgaattattg
ttaaaaggtgcaaaattaccagctgaaaaggccaaagaagagcattttgattcaaattgt
attacacctggaactccttttatggctcgtttatctgaatgtttacatttttatatacac
gataggttaaataaggatcctggatggaaaggagtgaaggttattttgtctgatgcaaat
gtgccaggagagggtgaacataaaataatggattacatcagaaaacaaagaggtcaacca
gatcacgatccaaatacccaacattgtctttgtggagcagatgcagatttgattatgtta
ggtttagcaacacatgaaccaaattttacaattattcgtgaagaatttaaaccaaacaaa
ccgagaccgtgcgatctttgtggtcaacttggtcacgaaatgaaggaatgtatgggtttg
gcaagattacaagatggcgaagatgaaaaaacttttggttcggagcaagaatttattttt
gttcgtttaaatgtacttagagagtatttagaacgcgaattacagatgcctaatttgcct
tttacgtatgactttgaacgagtaattgatgactgggtttttatgtgtttctttgttggt
aatgattttttaccacatcttccgagtttagagatcagagaaggtgccattgatcgattg
gttggtctttataaagattgtgtttacaaaacacatggttacttaacagatagtggtgat
gttaatttggaaagggtacaactgattatgtttgaattggggaaagctgaggatgaaatt
tttaaaaccaggcaacaaaaagaattggcgtttaaggctagggataaagcaaaaaaaaga
aggacagacgagtatcaacaacggcaaaggaaacccgattgggctatattagaaaacact
caatttgctccaatacctttaggtcaatcaaagacaatactaaatccaagacaagaagcc
tttcaaatacgaaaagcaggaatgcattcagcttcggacagtttgcaaagtgctgataat
aaagaagctttggaatcgatgttacgcaaagattcaaacacttcttcacctagtacggaa
gaaaataaagggattaaacgtaaacatgacgagagtgatgaggaagaagaaccaaacgat
gaagttcgtttgtgggaggatggatttaaagatcgttattatgaatcgaaatttgacgtt
acggttgaaaacttagaatttagaaacgcggtagctctgcagtatgttcgtggactgtgt
tgggttttgcgctattattaccaaggttgcgcatcgtggaaatggtattacccataccat
tacgcgccatttgcatccgattttataaatattgctggattaagcacagaatttagtact
gattctaaaccattccttccactacaacagttgatgggtgtatttcctgctgcaagtagt
cgtcatattccacaaccttggacacatttaatgagtgaccctgattctccaattattgat
ttttatccaactgattttaaaatagatttaaatgggaagaaatttgcttggcaaggtgtc
gctcttttaccgtttgtaaatgaaacacgtctttttaaagcgttagaaccgtattattct
gaattaacaccagaagaggttaaacgtaatataagaggcgatgatcgcttgtatgtggca
aatgggaacagagctcatggtattattaaagcactttattcagagagaattgataaagat
tttgagactgcagtcaaaattgatggcatgagtggaactgtactgttagcagatgattat
gttccaattggagaaactattaattctcccatatttggtttaaaatcaatacatgacaac
aaagtttgttgcataagatatagagatccaaagtacaacaaagaatacatttttcccgct
aggaaattaaaaggagcaaaaactccaccaagagtgttaaaacctcagggtatggacgat
gaaggtcatcgaaattggagaccacaaataggcatggcgccatctactacgagagcttcg
ttaggtcgacctggacatagagctttaaatcattacgtacccagaggttcttcaagggga
ggtcaagattcaagacaaaatcaatcatacagaggaggttatcagagttacaaccaacaa
aacagttatcagcaaggcggatattatcaaaatcaaagagatcaacaaaagggatccgga
aattattacaactcgaattattcgcaaggcagatcaaatcacggaagtggaggtggaggt
tacaattcgtataattcccaatcccaacaaggatattctcaacaaagaggcggatacaat
accaataattccggtagatatcaacaacaaggaaaccgcgatcagcatagaagaactggc
ggtccgtataaggacagatttgaaccgtacagttctcagtatagaagataa
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