Onthophagus taurus (bull-headed dung beetle): 111420185
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Entry
111420185 CDS
T07420
Name
(RefSeq) collagen alpha-1(XI) chain-like isoform X2
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
otu
Onthophagus taurus (bull-headed dung beetle)
Pathway
otu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111420185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
otu00536
]
111420185
Glycosaminoglycan binding proteins [BR:
otu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111420185
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
111420185
NCBI-ProteinID:
XP_022908882
LinkDB
All DBs
Position
7:complement(40794592..40805481)
Genome browser
AA seq
1866 aa
AA seq
DB search
MFYNKWAKEAIFKHFWLLCCLKIFVFQTVSGQKEIVDLLNHADLISEPFELKKVPGRCFS
NNSNNTIENDFGFKLSDKSQILLSTNNLFPHGFPKDFSILFVTRVFGPGNPIFTIYSENG
DEQLALTVGQNEVTLLYEDQDGLPEDGNLIPFDIPLNINEWHRLAFSVKGDSVTLISNCQ
STISKKLARKPSSTLTTSGIITMGHELIGGGFYNGDIQLLKIAPTPDEAYEICTIHAPNC
PVLTNDGSIVSNGSYSYSSSSSSGTSYYTTSYSSSSSSSSSNNLLNHGNNIDAKIKTSSS
NSLNNLSNHGSNIKNIEFSSNVETESNRGLNIIAQNNSNFDIVNSKLNQEMLRNKNNLFE
QRNEFLLNGNVQLEHLNQKRNSTEFKNFNQNVGYIDNMEHDLSTKDKDLQGVGSSLIGPD
YSQFSTETAEGTTTEIDENIDMTEQPEVTNASEKTLDLPDLPEYESSPTDSNNGPYSPNY
PYNPNRGPPGPRGYPGPPGLPGNPGPKGDSGRDGYPGVTGSPGPPGNVFMLPMNVQGNDK
GPDSQTESLRQMLAQHMMSMRGTEGPMGLTGLPGPEGPTGAEGTKGEPGEIGEPGPRGVR
GPIGHPGREGRRGRPGRDGDRGLSGPSGTKGEQGMVGLPGLPGDKGERGHLGLQGEKGMP
GHEGMQGEEGPPGLPGMPGEMGPRGFTGPRGLPGMPGSPGIPGNEGPIGPKGSQGPVGQP
GAPGQTGPAGSMGSPGPQGHLGPPGIMGPQGKPGIPGLPGSEGLPGHPGNPGIPGPKGDQ
GIQGSVGSIGFPGGRGPKGDEGKRGQQGDKGDKGDKGPEGEKGEAGSKGDIGVQGSVGAS
GLEGPEGPKGYDGPRGETGAIGPSGEKGKIGIQGFPGYPGNPGEKGDKGATGRVGSPGDK
GERGHPGIPGERGETGPRGFRGSRGRRGGEGQPGPKGDTGQPGPPGPQGEVGVQGPEGPR
GFAGPTGSPGLNGKDGIAGPPGERGAPGDSGPPGSPGAPGVVGPQGPTGEPGPIGEPGTP
GSPGIPGESGLPGEVGKEGSPGLPGPAGKPGSPGTSGLPGFPGERGMNGLPGIPGLKGEN
GPPGLIGPSGDKGQQGEPGKDGPPGADGRKGPSGSPGSGGAKGERGEPGPAGVMGRDGIA
GARGLPGAPGPIGPPGEDGDKGDIGPPGEKGFKGSKGESGPEGSSGPQGLRGEPGPVGPI
GERGPPGEIGRQGIKGEDGPIGIQGTAGPAGPQGLPGPPGIKGEIGDLGQKGPPGAPGSQ
GEQGPRGTKGVEGSPGATGPEGLQGIKGDRGEPGPMGTIGPEGKQGERGLQGQKGEEGKP
GLPGSIGPRGAIGPEGAKGVAGPPGFPGPPGEPGGVGVKGDIGKEGEDGKPGEPGLPGEI
GLPGKMGPVGTPGKPGSEGPAGVQGNTGLPGEKGDKGASGPPGPMGPVGVQGIPGSQGTT
GPRGSPGQAGDNGPPGTPGVPGSAGLIGSSGPRGQKGDRGKRGPKGHRGEMGHQGLKGEA
GEKGERGEKGPQGVEGKKGDIGPIGPPGLKGNDGPVGLSGLEGPAGPKGSEGIGGLKGEP
GPVGPPGPPGPAADMPLVPPELLFQLQSGNYDKGPPARRRRSLEELITEYEDIVTTTTGN
PGDANVDDEDGYNKEDVSLKFLDMYSSIYSMRQDLERVRKPVGTRDNPVRTCRDLYYGHP
QFLDGWYWIDPNLGMIDDAIYVYCNMSSEGESCVFPDVHSAKMPNIPWRKENNNKNDWYS
NLRGGFKITYETVGLVQMTFLRLLSENAYQNFTYTCMNSAAWFNTKTSKHDLSIKLLGEN
DQEFSYQAIKPIIVFDGCKSRKSKSETVFEIRTPKLNQLPIVDFYPVDYGNSNQAFGFNV
GPVCFK
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atgttctacaataaatgggctaaagaagccatttttaaacatttctggcttttgtgttgt
ttaaaaatatttgtatttcaaacagtttctggacaaaaagaaatcgtggacctcttaaat
catgctgaccttattagcgaaccatttgaactaaaaaaagttcccggaagatgtttttct
aataatagcaataatacaattgaaaacgattttgggtttaaattaagcgacaaatctcaa
attctactgagcacaaataatttatttccgcatggatttccgaaagatttttcaatccta
tttgtaaccagagtttttggacctggaaatccaatttttacaatttacagtgaaaacggt
gacgaacaattagctttgacagttggccaaaatgaagtaactctactttacgaggatcaa
gacggtttaccggaagatggaaatttaataccttttgatattccacttaacattaacgag
tggcatagattagcttttagtgtaaaaggtgattccgtaacgttgataagtaattgtcaa
tcaaccataagtaaaaaacttgcaaggaaaccttcttcgactcttactacttcaggaatt
attacaatgggccatgaacttatcggaggtggattctacaacggtgatattcaattattg
aaaattgcaccaactcctgatgaagcatacgaaatttgcacgatacatgcacctaattgc
ccagttttaacgaacgatggaagtattgtttcgaacggttcttatagttactcttcaagt
tcaagtagtggaacttcttattatacaacatcttacagtagttcatctagttcttcatca
agcaataatttattaaatcatggcaataatattgatgctaagatcaagacttcttcgagt
aactctttaaataatttatcgaatcatggaagcaatattaaaaatattgaattttcttca
aatgtagaaacagaatctaaccgaggactgaatataattgctcagaataacagtaatttt
gacattgtcaactcaaaactgaatcaggaaatgcttagaaacaagaataatctgtttgaa
caaagaaacgaatttcttttaaatggaaatgttcaattagagcatctcaaccagaaacga
aattcaacggaatttaaaaattttaatcaaaatgtaggatacatagataatatggaacat
gatttaagtacgaaggataaggatttacaaggcgttggaagtagtttaattggtcctgat
tattcacaattttctacggaaactgctgaaggaaccacaactgaaattgatgaaaatatt
gatatgaccgaacaaccagaagtcactaacgcatcagaaaaaacactagatcttccagat
ttgccggaatatgaaagttctccaaccgattcaaataatggtccctactctccaaattat
ccttacaaccctaacagaggtccacctggtccgcgtggttatcctggacctccaggatta
ccgggaaatccgggtccaaaaggagattcgggaagggacggttatccgggagtgacagga
agtcctggaccgcccggaaatgttttcatgcttccaatgaacgttcaaggaaatgataaa
ggtccagatagccaaacggaatccttaagacaaatgttagctcaacacatgatgtctatg
aggggaactgaaggtccaatgggcttgactggacttcccggaccggaagggccaacaggc
gcagaaggaactaaaggagaacctggtgaaattggcgaaccgggtccacgaggtgtaaga
ggtccgataggacatccgggacgtgaaggtagaagaggtcgaccaggaagggatggagat
agaggtctctctggaccttctggaacaaaaggcgaacaaggcatggttggtttaccaggt
cttcctggcgataaaggtgaaagaggacatcttggcttacaaggagagaaaggaatgcct
ggacatgaaggaatgcaaggggaagagggtcccccgggattgccaggaatgccaggagaa
atgggacctagaggatttacaggaccaagagggcttccaggaatgcctggcagcccagga
attccagggaatgaagggcctattgggcctaaaggcagccaagggccggttggacaaccg
ggtgcacctggacaaactggaccggctggatctatgggttcaccgggaccacagggacat
ttagggcccccaggaatcatgggtccgcaaggaaagcccggaattcccggtctaccagga
tcagaaggtttgccaggacatccgggaaatccgggaatacccggtccaaagggagatcaa
ggtattcaaggttcagttggctcgatcggatttcctggaggaagaggacctaaaggtgat
gaaggaaaaagaggacaacaaggagataagggtgacaaaggagacaagggccctgaagga
gaaaagggggaagctggtagtaaaggtgatattggagtacaaggaagtgttggtgcatca
ggtttagaagggccagagggacccaaaggatacgatggacctagaggagaaacaggggca
ataggtccttctggtgaaaaaggtaagattggcattcagggatttcctgggtatccagga
aatcccggtgaaaaaggagataaaggggccaccggaagagtagggtcaccaggtgataag
ggagaaagaggtcaccctggaattccaggtgaacgcggtgaaaccggacctcgaggcttt
cgtggttcaagaggcaggcgcggaggagaaggacagccaggtcctaaaggagatactggt
caacctggacctccaggtcctcaaggagaagttggagttcaaggcccagaaggtccacgt
ggattcgcggggcccactggatctcccggactgaacggaaaagacggtatagccggacca
ccgggagaaagaggagcccctggtgacagcggtccgccaggatctccgggtgcacccgga
gtggttggacctcaaggacctacaggggagccaggcccaattggggaaccaggaacacca
ggaagtccgggaattccaggcgaatcgggattacccggggaagtgggaaaagaaggtagt
cctggcctaccaggtcctgcaggaaaaccaggatcacctggaacgagtggattgccggga
tttccaggagaaaggggaatgaatggattgccaggcattcccggtttgaaaggtgaaaat
ggtccaccagggttaataggacctagtggagacaagggacaacaaggagaacctggtaaa
gatggaccaccaggtgccgatggaagaaaaggaccatccgggtctccaggatctggtgga
gcgaaaggagaacgtggagaacctggacccgccggtgttatgggacgcgatggtatagcc
ggtgcaagaggattaccaggagcacccgggccaattggacctccgggggaagacggtgat
aaaggtgacatcgggccacctggagagaaaggatttaagggttcaaaaggagaaagcggc
ccagaagggtcatcaggtcctcaaggattacgaggtgaacctggcccagtcggtcctatc
ggagaaagaggtcctcctggtgaaattggacgacaagggattaaaggagaagatggtcca
ataggcatccagggaactgctggaccagcaggtcctcaaggattaccaggtccaccagga
attaaaggagaaataggagatcttggccaaaaaggcccacctggtgctccaggatcgcag
ggagaacaaggacctagaggaacaaaaggagtagaaggttcaccaggagctactggaccc
gagggtttacaaggaataaaaggagatagaggagaaccgggtccgatgggaacaatagga
cccgaaggaaaacagggtgagcgcggtcttcaggggcaaaaaggagaagaaggaaagccg
ggtcttcctggatcgatcgggcctcgcggtgctattggtccggaaggtgcaaaaggagtt
gccggtccaccagggtttccaggccctcctggcgaacctggaggagtcggtgttaaggga
gatattggtaaagaaggtgaagacggtaaacctggagaacctggccttcctggagagatt
ggtttaccgggaaaaatgggtccagttggtacccctggaaaacctggctctgaaggaccc
gcaggagtacaaggcaacactgggctaccaggagaaaaaggtgataaaggagcctcaggt
cccccaggccctatgggacccgttggcgttcaaggaattccaggttcgcaaggaacaact
ggtccaagaggatcaccaggccaagctggcgataatggtccaccgggtacaccgggagtt
cccggatcagctggtctaattggttcttctggtcctcgtggtcaaaaaggagatcgcgga
aaacgaggcccgaaaggtcatcgcggagaaatgggccaccagggtttgaagggcgaagcg
ggtgaaaagggggagaggggcgaaaaaggtccacaaggagttgaaggcaaaaaaggtgac
atcggaccgattggcccaccaggtctgaaaggaaacgatggccctgttgggttatctgga
ttagaagggcctgctggccctaaagggtctgaaggaatcggtggattgaaaggagaacct
ggtcccgtgggtcctcccggaccgcccggaccggctgctgatatgcctttggtaccacca
gagcttttgtttcaattgcaaagtggaaactacgataaaggacctccagcacgaagaaga
agaagtctagaagagttgataactgaatatgaagatattgttaccacaacaactggaaat
cctggcgatgcaaatgttgacgacgaagacggttacaataaagaggacgtcagtttgaaa
tttttggatatgtatagcagtatttattcgatgaggcaagatttggagcgagttaggaaa
ccagttggtacaagagataacccagttagaacttgcagagatttgtattatggccacccg
caatttcttgacggttggtattggatagatccaaacttaggaatgatagacgacgcaatt
tatgtttattgtaacatgtcatcggaaggcgaaagttgcgtttttcccgacgttcatagc
gccaagatgccaaatattccctggagaaaagagaacaacaataaaaatgattggtattcg
aacttacgcggtggatttaaaattacttatgaaacagttggcttggtacaaatgacattt
cttcgtctgctttccgaaaatgcataccaaaacttcacgtacacgtgtatgaatagcgcg
gcttggtttaatacaaaaacaagtaaacacgacttgtctataaaattattaggagaaaac
gatcaagaattttcttatcaagcgattaaaccaatcatcgttttcgatggatgtaaatct
aggaaaagtaaaagtgaaactgtttttgagatacgaactccgaagctgaaccaattacct
attgtcgatttttatccagtagattatggaaattcaaatcaagcgtttggattcaatgtt
ggaccagtatgctttaaataa
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