Onthophagus taurus (bull-headed dung beetle): 111420858
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Entry
111420858 CDS
T07420
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
otu
Onthophagus taurus (bull-headed dung beetle)
Pathway
otu03015
mRNA surveillance pathway
otu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
otu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111420858
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111420858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otu03019
]
111420858
Messenger RNA biogenesis [BR:
otu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
111420858
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
111420858
NCBI-ProteinID:
XP_022909672
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Position
11:15859781..15869730
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AA seq
711 aa
AA seq
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MAENDLDLYADDIEDFAQDDFGGDNVDLYDDVISTPATGGGPSGDAAEAAPPPANNSNAE
ETNGATYPPAGNNVSTGTLGRRHQLYVGNLTWWTTDQDIANAVHDAGVNDFHEVKFFEHR
ANGQSKGFCVISMGSETSMRLCLDRLPKTTIHGQAPIVTLPTKQALSNFESQSKTRPNPP
NNANSRGQHPGQANHPIPSGPHHHHHQNFQPRMQMNSPMRHGGPMNAVVGMSVGPNGPPP
PPRMQGGPPPPPPFNGPPQMGPGGQQMRFQQPQWNGPPRPNMGPMPPQQMRGPLPPPGPG
QGPGHPRPPMQFQGPPQVQGPPRGMPGQGPPGGGGPPGPGGPPRPDWNPRPPPMQPGFPP
QGGGPPGHHPVGQGGPPPGMGGPRGPPGPPQGPPQGHPPQGPPAPHVNPAFFQQQQQQGG
GGGGGGPPPPQLNHHHHHHGMQSGPGMAQGPPMGPNSMPHGYNMPPNMTQSYPGPINDHP
QISEQEFEDIMSRNRTVSSSAIARAVSDAAAGEYASAIETLVTAISLIKQSKVANDDRCK
ILISSLQDTLRGVEDKSYSSGRRDRSRSRDRHRRGRRDRSPSRYRERSRDRERDRDRDRD
RYYADSYRERERDRERSRSRGGDRERDRERDYRDRDAEDSSSRVSRSRNKSPPEVVDPNA
EPSSKSRGGGGGGYYDDRYRERDSTRRGDPERERDRERERDRRDESHRSRH
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaacgatttggatttatacgctgatgatatagaagatttcgcacaggacgat
tttggaggtgataacgttgatctctatgatgatgttatttcaactccagctactggaggt
ggcccaagtggagatgcggctgaagctgcgccgcctccagcaaataattcaaatgcagaa
gagacaaatggggccacatacccaccagctgggaataatgtatcaacaggaactttagga
agaagacatcaactttacgttggtaatttaacttggtggacaaccgatcaagacattgca
aatgcagttcatgatgctggtgtaaatgactttcacgaagtaaaattttttgaacatcgc
gcaaatggtcaatcaaaagggttttgcgtcatttcgatgggttcggaaacaagtatgagg
ttatgtttggatcgtctaccaaaaactacgattcatgggcaagctcctattgtaaccctt
cctacgaaacaggctctcagtaactttgaaagtcagtcaaaaactcgccctaatcctcca
aataacgccaactcacgcggtcaacatcccgggcaagctaaccatcctattccttcaggt
cctcatcaccaccaccatcagaatttccaaccccgtatgcaaatgaactctccaatgcgc
cacggaggccccatgaatgctgttgttggtatgtctgtaggccctaacggtcctccacct
cctcctcgtatgcaaggtgggcctccacctcccccaccatttaatggaccccctcaaatg
ggtccgggtggtcaacaaatgcgtttccaacaacctcaatggaatggaccacccagacct
aatatgggacctatgccaccacaacaaatgagaggacctttaccaccaccaggacctggg
caaggtcctggacatcctagaccacctatgcagtttcaagggccgccacaagtacagggt
ccaccgaggggtatgccaggtcagggaccaccaggtggtggcgggccgcccggtccgggt
ggaccgccgcgacctgattggaacccgcgcccgcccccgatgcaacccggttttccaccg
caaggcgggggcccacccggccatcatccggtgggccagggcggtccgccgcccggaatg
ggcggaccgcgtggaccgcccggtccgccccaagggccaccacaaggccatccgccgcag
ggtccccccgcgccccacgtaaacccagccttcttccaacagcagcagcaacagggcggc
ggaggtggcggcggcggacccccaccgcctcaattgaaccatcaccaccatcaccatggc
atgcaatcgggaccgggaatggcccagggacctccgatgggccccaattcgatgccacac
ggttataacatgcctccgaatatgacgcaatcgtatccaggaccgattaacgatcaccca
caaatttccgaacaggaatttgaggatatcatgtctagaaatcgaacggtttcaagctca
gcaatcgcaagagctgtctcagatgccgccgctggtgaatatgcaagcgcaatagaaact
ctagtgacagcaatttccctgattaaacagtcaaaagtagcgaacgatgacagatgtaaa
atcttaattagttcgttacaagacacactcagaggtgttgaggataagagttacagttct
ggaaggagggatagatcgagatccagagatcgacatcgaagaggacgacgagatcgatcc
ccttctagatacagagaaagaagtcgcgatagagagagggatcgcgatagggacagggat
agatattatgctgacagctatagggaaagggaaagagacagagaaaggtccagaagtcgt
ggaggagatcgtgaaagagacagagaaagggattatcgtgatagagatgctgaagatagt
tcttcgcgagtatcacgatcgcgaaataaatcaccaccggaagttgttgatccaaatgca
gaaccatcaagtaaatcacgcggtggtggtggaggaggctattatgacgatcgttatcgg
gaaagagactcaacaagaagaggtgatccagagcgggaaagggatcgtgaaagggaacgc
gatcgaagggacgaatctcatcgttccagacattaa
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