Onthophagus taurus (bull-headed dung beetle): 111421347
Help
Entry
111421347 CDS
T07420
Name
(RefSeq) collagen alpha-1(II) chain-like
KO
K19719
collagen type II alpha
Organism
otu
Onthophagus taurus (bull-headed dung beetle)
Pathway
otu04512
ECM-receptor interaction
otu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
otu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111421347
04518 Integrin signaling
111421347
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
otu00536
]
111421347
Glycosaminoglycan binding proteins [BR:
otu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111421347
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
111421347
NCBI-ProteinID:
XP_071057074
LinkDB
All DBs
Position
Unknown
AA seq
1560 aa
AA seq
DB search
MKSAKILWLIFAASTFFSTTSEAAKVRKRFKDGVQNQQPYDDAYEEVDYGDNYDYTENEY
ENNNGLSSPKPLIPPKPTQPPDETPYVTSRIYQQPDDENPTNAPTGTIDIRIVTTSSPSI
SPDSHVSPFNCFDDGKYYREGEVWRKTVCTNCSCINGNINCTTNPECWRPTTSSTSTTST
TTSTTTSTTTESPTNFDLDFNDPVRGARGEPGYSGPIGRQGEPGMPGQPGNPGIPGIPGP
PGPLPDLTAYYQQLALSQSSQDKGPSSAAAELFFPQAQVGPVGPRGPPGPPGSLGPQGLQ
GTRGEIGEPGMGGAVGPPGQRGFPGPPGKDGEPGEDGEQGPVGSQGPPGARGLPGMPGLP
GNKGHRGFSGQDGAKGEQGQQGEKGMIGNPGPMGPIGLTGPAGPRGERGREGPPGPPGLR
GIDGIAGPPGQSGAVGKPGSPGFPGNPGSKGDQGSQGPKGSQGLQGPRGEAGRPGQAGEA
GPPGLNGKDGFPGEKGGPGSPGIPGPPGFPGARGLPGQLGSPGQQGVKGEPGLHGERGYK
GEPGFKGEIGAPGPRGVPGPTGPEGKRGKRGGRGPTGPPGLQGEKGPLGLRGLPGPDGAM
GPKGQTGDKGPQGTPGTKGNQGDMGRPGPPGIQGERGLSGRNGMPGKPGSPGERGIQGAD
GKAGEPGPQGIQGVPGPIGVPGEKGLQGEQGKDGEVGQPGAQGPRGDPGKDGSPGIQGPP
GPSGADGERGPPGSPGPTGFQGLPGAPGNPGASGKDGEQGVQGPPGLPGSIGARGERGFP
GERGPVGQPGLTGLRGPIGSQGQDGPPGPPGAKGDKGHSGHPGMVGLPGLKGPPGHQGEK
GERGSLGAPGPEGPPGRQGERGIQGIVGPPGPPGEPAERGEPGLPGFPGEPGAPGTPGER
GAVGPQGNQGFPGLQGLVGAPGVKGERGLLGAKGQQGNPGPVGKPGEVGPQGLIGLTGAK
GNRGEAGARGDAGLMGPPGRPGEPGQTGQPGNSGPAGPPGIPGIKGVAGDLGRPGPPGLS
GQPGPPGIEGAKGETGSDGPPGLTGPSGPQGSAGERGLTGLPGTSGPPGPTGLRGPPGEQ
GAPGRPGNEGAPGPIGLLGPPGPPGPAGDQGHEGPPGKPGPPGIAGRPGDKGPIGLTGNQ
GSPGAQGLPGPPGLQGPIGLSGERGAKGEMGPQGVEGPQGQRGKSGPPGLEGAKGVAGEE
GPKGAKGHRGFNGLQGLPGSPGQQGDKGMQGLPGIPGKDGELGPRGLPGRDGSPGLQGNL
GNPGPRGPSGDNGKIGPMGPAGPPGPPGPPGDGFGFDAANLAALLQQGQINNQKGPDPLG
DEPLRIFGSTITDEERREIVIKAYEQLKASFEKFKKPNGQKNYPGKSCRDINVAHPNLGD
GEYWVDPNEGDPKDSILVHCDMKRQATCVIPKPAKTPEISLNLKQHEVWLGEIEQGMKIT
YKSDSNQIGFLQLLSGHAEQNITYHCKKSVAYYDVNKHTYRKGLKLLAWNDAELTPKGNQ
RFKYDVIEDECRFRTDSWSQSVLSYKTDKSVRLPIVDVAIRDVGEEGQAFWIEIGPVCFY
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgcaaaaattttgtggctcatttttgcggcatcaacgttcttttcgacgact
tcggaagccgctaaagttaggaaacggtttaaggacggcgtccaaaatcaacaaccctac
gatgatgcttacgaagaggtcgattatggcgataattacgattatacagaaaacgaatac
gaaaataataacggtttatcttcaccaaagcctttaattccgccgaaaccgactcaacca
cccgatgaaactccctatgtaacatcgcgaatttatcagcaacccgatgacgaaaatcca
acgaacgctccaacgggaaccatcgatataaggattgttacaacgtcttcaccatcgatt
tcacccgattcgcacgtttccccgtttaattgcttcgatgatggaaaatactacagggaa
ggtgaagtttggaggaaaactgtgtgtacaaattgttcttgtattaacggaaatattaat
tgtacgacgaatcctgaatgttggagaccaaccacttcttcaacttcaacaacatcaaca
acgacatcaacaacaacatcaacaacaacagaatcccccacaaatttcgatttggatttt
aatgatcctgttcgtggtgcgagaggtgaaccgggttattcgggtccaattggacgccaa
ggagaaccaggaatgccgggtcaaccaggaaatccggggattcccggtattccaggacct
ccaggtcccctccctgacttaacagcttattaccaacaattagcgctatcacaatcatct
caagataaagggccatcttccgcagctgcggaactttttttcccacaggctcaagttggg
ccggttggaccaagaggtcctccgggtcccccagggtctctaggtccccaaggtttgcaa
ggaacgagaggagaaattggcgaacctggaatggggggagctgtgggtcctcccggtcaa
cgaggatttcctggtccaccgggaaaagatggggaacctggtgaagatggggaacaaggc
cccgtggggagtcaaggcccaccgggtgcgaggggattacctggaatgcctgggttacct
ggaaataaaggtcatagaggatttagcgggcaagatggggctaaaggcgaacaaggacaa
caaggtgaaaaaggaatgattggaaatcctggaccgatgggccccattggtctcacggga
ccagctgggccacgcggtgaaagaggaagagaaggacctccaggtccacccggattacga
ggaattgatggaatagctggacctcccgggcaatccggagccgtgggaaagccaggttca
cccggttttccaggaaaccccggaagtaaaggagatcaaggatcgcaaggcccgaaaggg
agtcaaggacttcaaggtccacgaggagaagctgggcgtcctggacaagcgggagaagca
ggcccacctggtttaaacggcaaagatggcttccccggcgaaaaaggcggccccggttct
cccggaattcccggcccacccggattcccgggagcaagaggcctccctggtcaattagga
agccccgggcaacaaggggttaaaggagaacctgggttacacggagaacgcggttacaaa
ggagaacccggttttaaaggggaaatcggcgcccccggaccaagaggagtcccaggccca
accggccctgaaggcaaacgtggaaaacgagggggaagaggaccaactggccctccagga
cttcaaggtgaaaaaggacccctcgggttgagagggttacccggacctgatggagcaatg
gggccgaaggggcaaacgggagataaaggccctcaaggaacaccgggaactaaaggaaat
caaggggatatgggaagacctggaccacctggtattcaaggagagagagggttatctgga
agaaatggaatgccggggaaaccggggagtccaggtgaaagaggaattcaaggtgctgat
gggaaagctggagaacctgggccgcaaggaatccaaggagttcctgggcctataggagta
cctggggaaaaaggacttcaaggcgaacaaggaaaagatggagaagttggacaacccgga
gcacaaggtccaagaggagatcccggaaaagatggttcccctggaatacaaggtccacca
ggaccatcaggggccgatggggaaagaggaccaccaggatctcctggcccaacgggattc
caagggcttccaggtgcaccaggtaatccaggagcgtccgggaaagatggggaacaagga
gttcaaggcccaccgggtcttccaggatcgattggagcaagaggcgaacgaggatttcct
ggggaaagaggccctgttggtcaacctggcttaacagggctacgagggccgattggatcg
caagggcaagatgggccaccgggcccacctggcgcgaaaggagataaaggccattcaggt
caccccggaatggttggattacccggattaaaaggccccccaggtcatcaaggcgaaaaa
ggcgaacgcggctcactcggcgccccaggtcctgaaggacctcctggtcgccaaggcgaa
cgcggcattcaaggaattgttggcccacccggtccacccggagaacccgccgagagaggc
gaacccggattacccggatttcccggggaacccggcgcacccggaactccgggggaaaga
ggggctgttggcccacagggaaatcaaggattccccggtttacaaggattggttggagct
ccgggtgttaaaggagaaagaggattactcggagctaaaggtcaacaaggtaatccagga
cctgtaggaaaacccggcgaggttggaccacaaggattaattgggttaactggggcgaag
ggtaatcggggagaagcgggagcgaggggggatgcggggttgatggggccacctggaaga
cctggagaacctggacaaactggtcaacctggtaattcaggaccagcaggtccaccagga
atccctgggattaaaggtgtagctggagatttaggtagaccgggccctccaggacttagt
gggcaacctggacccccgggaattgaaggggctaaaggtgaaacgggttctgatggtcca
cctggattaacggggccgagtgggccgcaaggttctgcgggagagcgtggattaacggga
ttaccggggacttcaggaccaccgggaccaactggattaagaggaccacctggggaacaa
ggagcgcctggtcgaccaggaaacgaaggagccccgggtcccattgggttattaggcccc
cccgggccaccgggacccgctggggatcaaggccatgaaggtccccccggcaaaccgggt
ccaccgggaatcgcgggacgaccaggagataaaggcccgattggtttaacgggaaatcaa
ggatcaccgggggctcaaggattacccggccctccagggttacaaggaccgattgggttg
agtggggagagaggtgcgaaaggcgaaatgggccctcaaggtgttgaaggcccccagggg
caacgaggaaaatcgggacctcctggtttagagggagctaagggtgtagcgggagaagaa
ggtccaaaaggggcgaaaggacaccggggatttaatgggctccaaggattacctggttcc
cccggtcaacaaggtgataaagggatgcaaggactccccggaattccggggaaagatgga
gaactcggaccaagaggacttccagggcgagatggttctccgggtctccaaggaaactta
ggcaaccccggcccaagaggtccatccggcgataacggcaaaattggcccaatgggtcca
gcaggtcctccaggtcccccaggtccccccggcgatggattcggattcgacgccgctaat
ttagccgcgttattacaacaaggacaaattaataatcaaaagggacccgacccactcgga
gatgaaccattaagaatcttcgggagcaccatcaccgacgaagaaagacgagaaatcgtc
attaaggcttacgaacaactcaaagcttcttttgaaaaatttaaaaaaccaaacggccaa
aagaattacccaggaaaaagttgcagagacattaacgtagctcaccctaacttaggagat
ggggagtattgggttgacccaaatgaaggtgatccaaaagattcgattttagttcattgc
gatatgaagagacaagcgacttgcgttattccaaaaccggcgaaaacacccgaaatttcg
ttaaatttgaaacaacatgaagtttggttgggcgaaatcgagcaagggatgaagataacg
tataaatctgatagtaatcaaatcggatttttgcagttattgtcggggcacgcggaacaa
aatattacgtatcattgcaagaaatctgtcgcttattacgatgttaataaacatacttac
cggaaaggtttaaaacttttagcgtggaacgatgctgaattaacaccgaaaggaaatcaa
agatttaagtatgacgttattgaagatgagtgcaggttccggacggattcttggtcccaa
agtgttctttcctacaaaacggacaaatcggtgcgtctcccgatagttgacgtcgcgatt
agggatgtgggtgaagagggacaagcgttttggattgagataggcccggtttgtttctat
taa
DBGET
integrated database retrieval system
