Onthophagus taurus (bull-headed dung beetle): 111423533
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Entry
111423533 CDS
T07420
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG5
KO
K11125
protein SMG5
Organism
otu
Onthophagus taurus (bull-headed dung beetle)
Pathway
otu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
otu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111423533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otu03019
]
111423533
03032 DNA replication proteins [BR:
otu03032
]
111423533
Messenger RNA biogenesis [BR:
otu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111423533
mRNA cycle factors
Common to processing body (P body) and stress granule
111423533
DNA replication proteins [BR:
otu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
111423533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
DNA_pol_phi
TFIIA
Drc1-Sld2
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
111423533
NCBI-ProteinID:
XP_022912541
LinkDB
All DBs
Position
3:24972893..24981038
Genome browser
AA seq
901 aa
AA seq
DB search
MKKSYNATSDVHQKEGQEHAKKLYRYIREHVKNLDDARSCARNVSDLFKPSVQVQRSKFK
DYCERLIFTNPLLTGRKGEELLWRKGFYEVVVAAKQLKKSEYTSEEKSSLESHINAGIGH
YHHYILRLRKEFDLDLNGVVDFVGNVEYGRLKRTEVIEKEIIEWANLSVHRSLVYLGDLS
RYKLDLYPNWDQNLVIRYYSQALLFKPEFGMPHNQMGTLANNGNNLLDASYHYLRSMCCR
NAFEGTENNLIRLFEKNATILSQFPIENPESDVIIQLEPSDYIKRFICRFLNLVEVWWFE
KKVNRIYDLCHQANVDLQECMNYLKPLTAESVDTNDTIDSDSNPPNYLSHNVIFKIVSIC
LICIYKLQSSNSSMTSSVVAFSLAVYSQLVSTVINHIQEGILNFPLPPPENNLKDLKKWL
NKNSRKKKSVKRTRRRRKLINSDSEDDDDEEELSDDNNDDDNESLNSNQSEEEDDSDESF
DEDEINQEIKEKIVDDKSDKSSNDGIKNTQEDILKKSKLLELNDLLSIIGDEPLLQSIII
FNDYLKTDVEILKSCGKLTRSLLHQIVNLINLINIDFNNNKDLNYTFLKENVKKLALPED
VMLKGIEILSENQREIDWKLSQKVELGDKELNVLRIIKTVSFGQYLTTVHETGVVYDKEI
KLFVAKQDEIFSNGTDEIIQREIDVENFDPIKKSIGENKLDPKSQLLKMKHMGQLWLTAE
VKDLETRVKGKPSLSPYLVIDADSLILHTQMVKQLVYSRKFIVLVPSAVVSALDDLKSEK
QEARDAIRWLESQFHQGNRFFRCQRPQERAPIPYIVYPKKRDKETQIFIQIIECCHYLAQ
QQKGASNLVTLLVGNSNVNETANNKVENKLSYVGLAKTAGVNLEGIVEFYGRWKRSVKGK
R
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcttacaacgctaccagcgatgtccaccaaaaggaggggcaagaacatgcc
aaaaaattgtatagatacataagggaacatgttaagaatttggatgatgctcgaagttgt
gcaagaaacgtttcggaccttttcaaaccaagcgttcaagtacaacgaagtaaatttaaa
gattattgcgaacgattaatatttacaaacccattattaacgggtcgaaaaggtgaagag
ctattatggcgaaaaggtttttatgaagtagtagttgccgcgaagcaattaaagaaatct
gaatacacatcggaagaaaaatcgagtttagagagccacataaacgccggaattggccat
tatcaccattatattctacgattacgcaaagaattcgatttggatttgaacggggttgtc
gattttgttggaaatgtagaatatgggcgattaaaaagaacggaggtgattgaaaaagag
ataattgagtgggctaatttatctgtacaccgatctttagtgtatttaggcgatttatcg
cgatacaaattagatttatacccaaattgggatcagaatttagtgattcggtattattct
caagcccttttatttaaacctgaatttggaatgcctcataatcaaatgggaactttggcg
aataatggaaataatttattagatgcgagttatcattatttgagatcaatgtgttgtcgg
aacgcttttgaagggacagaaaataatttgattaggttatttgagaaaaacgcgacgatt
ttgagccaatttcccattgagaatcccgaaagcgatgttattatccaattagaaccgtct
gattacatcaaaagattcatttgtaggtttttaaatttagttgaggtgtggtggtttgaa
aaaaaggtaaatcgtatttacgatttatgccaccaagccaatgtcgatctccaagaatgt
atgaattatttaaaaccactcactgcagaaagtgtcgatacaaacgacacaatcgattca
gactcaaacccaccgaattatttaagtcacaacgtcatttttaaaatcgtttcaatttgt
ttaatttgtatttataaattgcaatcgtcaaattcgtccatgacgtcgagcgttgtagct
tttagtttggcagtttactcccaattagtttcaactgtaattaatcatattcaagaaggg
attttaaactttcctttacccccgccggaaaataatttaaaagatttaaaaaaatggtta
aataaaaattcgaggaaaaaaaaatcggttaaaagaacgagacgaaggcgaaaattaatt
aattccgattctgaggatgatgatgatgaagaagaattgagcgatgataataatgatgat
gacaacgaaagtttaaattcgaatcaatcagaggaagaagatgattctgatgaatcattc
gatgaagacgaaattaatcaagaaattaaagaaaaaatcgtcgatgataaatcggataaa
agctcaaacgacggaataaaaaacacccaagaagatatattaaaaaaatcaaaacttttg
gaattaaacgatttattatcgataatcggagacgaacctttattacaatcgattataata
tttaacgattatttaaaaaccgacgttgaaatattaaaatcatgcgggaaattaacccga
tccctcctacatcaaatcgttaacttaatcaatttaataaacatcgattttaacaataac
aaagacttaaattacacatttttaaaagaaaatgttaaaaaattggctttgcccgaagat
gttatgttaaaagggatcgagattttaagcgaaaatcaacgggaaatcgattggaaattg
agtcaaaaagtcgaattgggcgataaagaactaaacgttttaagaattattaaaacggtt
agtttcggacagtatttaacgaccgttcatgaaaccggtgttgtttacgataaagaaatt
aaattgttcgttgctaaacaagatgaaatcttttcgaatggaactgatgaaattatacaa
cgtgaaatagatgtggaaaatttcgacccaattaaaaaatcaatcggtgaaaataaatta
gacccaaaaagtcaactcctaaaaatgaaacatatgggacaactctggttaacagctgaa
gtaaaagatttagagactcgagttaaaggaaaaccatcgctttcaccttatttagtaata
gacgccgattcattaatattacacactcaaatggtgaagcagctagtttattcaagaaaa
ttcatcgttttagtcccatcagcagttgtttcagctttggatgatttaaaatcggaaaaa
caagaagctcgcgatgcgattcgttggttagaatcgcaatttcatcaagggaatcgtttt
ttccgatgtcaaagaccgcaagagcgagctccaattccttatattgtctatccgaaaaaa
cgcgacaaggaaacgcaaattttcattcaaattattgaatgttgtcattatttggctcaa
caacaaaaaggtgccagtaatttagtaacacttttggtgggaaattcaaacgttaacgag
acggctaataacaaagttgagaataaactgagttatgttggtttggcgaaaacggccggg
gtaaatttggagggaattgttgagttttatgggagatggaagaggagtgttaaaggaaag
agatga
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