Onthophagus taurus (bull-headed dung beetle): 111424788
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Entry
111424788 CDS
T07420
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
otu
Onthophagus taurus (bull-headed dung beetle)
Pathway
otu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111424788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otu03019
]
111424788
03041 Spliceosome [BR:
otu03041
]
111424788
Messenger RNA biogenesis [BR:
otu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111424788
Spliceosome [BR:
otu03041
]
Complex B
Other components
Prp19-related factors
111424788
Complex C
111424788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_12
TPR_2
TPR_8
TPR_15
Mad3_BUB1_I
TPR_10
NRDE-2
PPR
ARM_TT21
ARM_TT21_C
TPR_IF140_C
Motif
Other DBs
NCBI-GeneID:
111424788
NCBI-ProteinID:
XP_022914243
LinkDB
All DBs
Position
6:2480876..2483641
Genome browser
AA seq
852 aa
AA seq
DB search
MPVTETLKKLEIIFTDEDLPYEEEILRNPYSVKHWLRYIDHKKNGPKQAINIIYERALKE
LPGSYKLWYNYLKTRRKQIKGRCIIDPGYDEVNNAFERALVFMHKMPRIWMDYCTFLTDQ
CRITRTRKVFDRALRALPITQHHRIWPLYLGFIRKHDIPETAVRVFRRYLKLCPENTEEY
VDYLKEIDRLDEAAVQLAKIVNNENFVSQHGKSNHQLWNELCDLTSKNPDSVHSLNVDAI
IRGGLRRYTDQLGHLWNSLANYYVRSGLFDRARDIYEEAVQTVTTVRDFTQVFDAYAQFE
ELSLSKRMEQVAALSNPTEEDDVDLELRLARFENLMERRLLLLNSVLLRQNPHNVQEWHK
RVKLYEGKPHEIINTYTESIQTVDPKLAVGKLHTLWVEFAKFYEKNRQIDDARLIFEKAT
QVSFVKVEDLASVWCEWAEMEIRNENYEKALELMHKATVLPSRKVAYHDDKETVQSRLYK
SLKVWSMYADLEESFGTFKTCKAVYDRILDLKIATPQIIINYGLFLEENNYFEEAFRAYE
KGISLFKWPNVYDIWTVYLTKFLKRYGGSKLERARDLFEQCLENCPQKFSKPLYLLYAKL
EEEHGMARHAMAVYERATNAVLPEEMFEVFNIYIKRAAEIYGVPKTRTIYEKAIEVLPED
KTREMCLRFAEMETKLGEIDRARAIYAHCSQICDPRVTMDFWNIWKEFEVRHGNVDTMRE
MLRIKRSVQAMYNTQVNMMSAQMLNSAGSVAGTIADLAPGVKDGMRMLEAKAVEMAGTSG
VGKSGNIMFVRGETQGSNNDRVVNPDEINIDDDDSDQEQEGVEEDADVPLEQQSVPLKVF
GGLKKNNENEDE
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaacagaaactttgaaaaagctagaaataatatttactgatgaagatcttccg
tatgaagaagaaatacttcgtaatccttattcagtaaaacattggcttagatatatagat
cataaaaagaatggacctaaacaagcaattaacataatttatgaaagagcactaaaagaa
cttcctgggtcatataaattatggtataactatttaaaaacaagaagaaaacaaataaaa
ggtcgttgcataatagatcccggttatgatgaagtaaacaacgcgtttgaaagagcttta
gtgtttatgcacaaaatgcctagaatttggatggattattgcacctttttaaccgatcaa
tgtaggataacgcgaacacgaaaagtatttgatcgggctttaagagctcttccaattacg
caacaccaccgaatatggccactatatttaggttttattcgaaaacatgatatcccagag
acagctgtacgagtttttaggagatacttaaaattatgtcccgaaaatacagaagaatat
gttgattatttaaaagaaattgatcgattagatgaagccgctgttcaattagccaaaata
gttaacaatgaaaatttcgtttctcaacatggcaaatcaaatcaccaactttggaacgaa
ctttgtgatttaacatcaaaaaatcccgattctgtgcattcactgaatgtagatgcgatt
attcgaggtggtttacggagatacacagatcaattaggacatttatggaattctttggcg
aattattacgttagaagcggcttatttgaccgcgctagagatatttatgaagaagcggtt
caaactgtaactacagtacgcgattttacccaagtttttgacgcttacgctcaatttgaa
gagttaagcttgtcgaaacgtatggaacaagtcgccgcactatcaaatccgaccgaagaa
gacgacgttgatttagaattgaggttagcgcgattcgaaaatttgatggaacgaagatta
ttacttctcaattcggttttattgcgacaaaaccctcacaacgtacaagaatggcataaa
agagttaaattatacgaaggaaaacctcacgaaatcataaacacttacacagaatcgatt
caaacggttgatccgaaattagcagtgggaaaattgcatactttatgggtggaatttgca
aaattttatgaaaaaaatcgacagattgatgatgcgagattaatttttgagaaagcgacc
caagtttcgttcgtaaaagttgaagatttagcgtccgtttggtgtgaatgggccgaaatg
gaaattcgtaatgaaaactacgaaaaagctcttgaattgatgcataaagcgacggtttta
ccatcccgcaaagttgcttatcacgacgacaaagaaaccgttcaatctcggttgtataaa
tcacttaaagtttggtcaatgtacgccgatttggaagaaagtttcggtacatttaaaaca
tgcaaagccgtttacgaccgaatcttagacctaaaaattgcaactccccaaatcataatc
aactacggattatttttagaggaaaataattactttgaggaagcgtttcgcgcttatgaa
aaaggaatttcactttttaaatggccgaacgtttatgatatttggacggtgtatctaaca
aagtttttgaaacgttatggaggaagcaaattggagcgagcacgagatcttttcgaacag
tgcttagaaaattgtcctcaaaaattttcaaaaccgctttatttactttacgctaaatta
gaagaagaacacggaatggcgagacatgctatggctgtttatgagcgtgccacaaacgcg
gttttaccagaagaaatgttcgaagtctttaatatttacataaaaagggctgcggaaatt
tatggcgtcccaaaaaccagaacaatttacgaaaaagcaatcgaagtcctcccagaagac
aaaacacgcgaaatgtgcctaagatttgcagaaatggaaactaaactaggcgaaattgat
cgagccagagcaatttatgctcattgcagtcaaatttgcgatccccgcgttacaatggac
ttctggaatatatggaaagaattcgaagtccgtcacggaaacgtagacacaatgagagaa
atgttacgtattaaacgaagcgtccaagcgatgtataacactcaagttaatatgatgtcg
gcacaaatgttaaattcagcaggttcagttgcaggaaccattgcagatttggcaccaggc
gttaaagacggaatgcgaatgttagaagctaaagctgttgaaatggctggaacttcaggt
gttggcaaaagcggaaatataatgtttgttcgtggcgaaacacaaggaagtaacaatgat
agagttgtaaaccctgatgagatcaatatcgacgatgacgatagcgatcaagaacaagaa
ggtgttgaagaagatgctgatgttccattggaacaacaaagcgttccattaaaagttttt
ggaggtttaaagaaaaataatgaaaatgaagatgaataa
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