Onthophagus taurus (bull-headed dung beetle): 111429275
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Entry
111429275 CDS
T07420
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
otu
Onthophagus taurus (bull-headed dung beetle)
Pathway
otu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111429275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otu03041
]
111429275
Enzymes [BR:
otu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111429275
Spliceosome [BR:
otu03041
]
Complex C
Other components
Step II factors
111429275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
111429275
NCBI-ProteinID:
XP_071050548
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All DBs
Position
1:2852441..2899217
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AA seq
1194 aa
AA seq
DB search
MEEDNVHRLEAVNDQTGGLIIRKKEPTFKVPQSSRLGLDKLSAQIRKQKEENERKMSFSI
SEEDGGEESTSHGIKKSKENRKFRQPQSETPTYTGGITEEARQRVLDRMNRAREKRIFAS
TKDLKRKSKDEKHSKDRNRDRDRDKDYERRNRYVKSEREPSRSERTPKFSDEPSTPNIKL
KDNTSRSSWDDDDPVPSKKSSWDFPTPNVYKSPSGGDWSERSTKSKYEEERGKSHKKSDK
KQYDNTPRATPAHKYNSWAKDRKKTGATPGPIKEEGHVKWESTVDRQLWEEEQRRIDREW
YNMDEGYDDENNPFSSVSDEYTKKKEEQLEQRRKKRLSAQQRQINKDNELWERNRMITSG
VVHSVDFSEDFDEESVDRVHLLVHNIVPPFLDGRIVFTKQPEPVVPVRDATSDMAMVARK
GSHLVRVYREQKERRKAQKKHWELGGTTIGNIMGIKKKEDEEDAKFNKDNDTADYKTDQK
FAEHMTKTEAVSEFSRKKTISEQRRYLPVFAVRQELLNVIRENSVVIIVGETGSGKTTQL
TQYLHEDGYSKYAMIGCTQPRRVAAMSVAKRVSDEMGTQLGDEVGYAIRFEDCTSENTVI
KYMTDGILLRESLREPDLDHYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSA
TMDSSKFSMFFGNVPTFTIPGRTFPVETLFSKNPVDDYVDAAVKQALQIHLQPPSGDILI
FMPGQEDIEVTCEVLAERLQEIENAPELSILPIYSQLPSDLQAKIFQRSPEGIRKCVVAT
NIAETSLTVDGIIFVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQA
FRLYTERQYKDELLITTVPEIQRTNLANTVLLLKSLGVQDLLQFHFMDPPPQDNILNSLY
QLWILGALDHTGVLTKLGRQMAEFPLDPPQCQMLIVSSQMGCTAEILIIVSMLSVPSIFY
RPKGREEEADGVREKFQVPESDHLTYLNVYNQWKQNNYSSHWCNEHFIHIKAMRKVREVR
QQLKDILIQQKLEITSCGTDWDIIRKCICSAYFHQAARLKGIGEYVNCRTGMPCHLHPTS
ALFGLGNTPDYVVYHELVMTAREYMQCVTSVDGHWLAELGPMFFSVKETGKSGRAKKKQA
AEHLQEMENQMQVAQEEMKARKEAAEKREAALNKGQEIISAGATPRRTPARFGL
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagataatgtgcaccgtttagaggctgtaaatgatcaaactgggggtttaatc
atacgcaaaaaagaacctacctttaaagtacctcaatcctcccgtttgggtctagataag
ttatccgctcaaatccgaaaacaaaaagaggaaaatgagcggaaaatgtcgttttctata
tccgaagaggatggtggcgaagaatcaacgagccacggtattaaaaagtcgaaagagaat
cggaaatttcgtcaaccgcaaagtgaaactcctacttataccggcgggataaccgaggag
gccagacaaagggtgctggatagaatgaatagggcgagggagaaacgtatttttgctagc
acaaaagatttaaaacgaaaaagtaaagatgaaaaacatagtaaagatagaaatagagat
cgagacagggataaagattacgaaagaagaaacagatatgttaaatccgaaagggaacca
agcagaagtgaaagaacaccgaaattttctgatgaaccatcaactccaaacataaaattg
aaagataatacatcaagatcgtcttgggatgatgacgatcctgttccttcaaaaaaatct
tcgtgggattttccaaccccaaatgtttataaatcaccaagtgggggagattggtctgaa
agaagtactaagtcaaagtatgaagaggaaagaggaaaatcacataaaaaaagtgataag
aaacaatatgataacactccaagggctaccccagcacataaatataactcttgggcgaag
gataggaaaaaaactggtgcaactcccggtccaataaaggaagagggacatgtgaaatgg
gaatctacagtcgatagacaattatgggaagaagaacaacgaagaattgatagggaatgg
tacaatatggatgaaggatatgatgatgaaaataacccattttcaagtgtaagtgatgag
tatacaaagaaaaaagaggagcaattagaacaaagaagaaagaaacgactttcagctcaa
cagagacaaattaataaagataacgaactttgggagagaaatcgaatgatcacttcaggt
gtagtccattccgtagattttagtgaagatttcgatgaagaatcagtcgatagggttcac
ttattggttcataacatcgttccaccatttcttgatggaagaattgtattcactaagcaa
cccgaacctgttgtacctgttagggatgcaacctctgatatggcgatggtcgctagaaaa
ggatcccacttagttcgagtttatcgcgaacaaaaggaacgtcgtaaagctcagaaaaaa
cattgggaattaggaggaacaacaataggtaacattatggggattaaaaagaaagaagat
gaagaagacgcaaagtttaataaagataatgacaccgctgattataaaacagatcaaaag
tttgccgaacacatgactaaaactgaagctgttagtgaattttcaaggaaaaagacgata
tcggaacaacgtagatatctaccggtgtttgcggttaggcaagaactgttaaatgttatt
agagaaaattcggtggttattattgttggtgaaaccggtagtggtaaaacgacacaatta
actcaatatttacacgaagacggttatagtaaatacgcgatgatcggttgtactcaaccg
cgtcgcgttgccgcgatgtcagttgcaaaacgtgttagtgacgaaatgggaactcaatta
ggtgatgaagtggggtacgcaattcgttttgaagattgcacatcagaaaacacagtaata
aaatatatgacggatggtattttattacgagaaagtcttcgggagcccgatttagatcat
tatagtgccattattatggatgaagcccacgaacggtcgttgagtactgacgttttgttt
ggacttttacgtgagattgttgcccgtagacacgatttaaagttaattgtaacttctgcg
acgatggattcaagcaaattttcaatgtttttcggaaatgtaccgacttttactattcct
gggagaacctttccagttgaaactctttttagtaagaatcccgttgatgattatgtagat
gccgctgttaaacaagctttgcaaattcatcttcaaccaccatcaggagatattttaatt
tttatgcctggacaagaagatattgaagttacttgtgaggttcttgcggaaaggttacaa
gaaatcgaaaatgcacccgaattatcaattttaccaatatattcgcaattaccatcagat
ttacaagcgaaaattttccaaagatctcccgaaggaatcagaaaatgcgttgttgccaca
aatatcgctgaaacttcgcttactgtggatggaattatttttgttattgattcgggttat
tgtaaattaaaagtttataatccaagaattggtatggatgcgttacagatttatccgata
agtcaagctaatgcgaatcaaagatctggtcgagctggtcgtacaggaccgggacaagca
tttcgattatacaccgaacgccaatacaaagacgaattattaataacaaccgttccggag
attcaaagaactaatttagcaaacaccgttttattattaaaatcgttgggagttcaagat
ttacttcaatttcattttatggacccacccccacaagataacattttaaactcgttgtat
caattatggatattaggggctttggaccacaccggagttttgactaaattggggagacaa
atggctgagtttcctttggatccccctcaatgccaaatgcttattgtttcgagccaaatg
ggatgtactgcagaaattttaattattgtttcgatgttatcggttccatcgattttttat
agacctaaagggcgagaggaagaagctgatggagttagggaaaaatttcaagtgcctgaa
agtgatcatttgacatatttgaacgtttataatcaatggaaacaaaataattattcatca
cattggtgtaacgagcacttcatccatattaaagcaatgagaaaagtgcgcgaggtaaga
caacaattaaaagacatcctcattcaacaaaaattagaaataacttcatgcggaaccgat
tgggacataataagaaaatgtatttgttcagcttatttccaccaagcagctcgtttaaaa
ggaataggagaatacgtaaattgtcgaacaggaatgccgtgtcatctccatccaacatcg
gcgttattcggtttaggaaacacccccgattacgtcgtgtaccacgaattagtgatgaca
gctcgagaatacatgcaatgcgtcacttccgttgatggtcattggttggccgagttagga
ccaatgtttttctcggttaaagaaactggtaaatcggggagggccaaaaagaaacaagca
gctgaacatctacaagagatggaaaatcaaatgcaagttgcccaagaagagatgaaagcg
aggaaagaggcggcggaaaagcgggaagccgcgttaaataaaggacaagaaattatttct
gctggggctacacccagaagaactcccgctagatttgggttataa
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integrated database retrieval system
