Onthophagus taurus (bull-headed dung beetle): 139429645
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Entry
139429645 CDS
T07420
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
otu
Onthophagus taurus (bull-headed dung beetle)
Brite
KEGG Orthology (KO) [BR:
otu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otu03041
]
139429645
Enzymes [BR:
otu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139429645
Spliceosome [BR:
otu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
139429645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
Helicase_C
DEAD
YTH
OB_NTP_bind
Ank_2
Ank_5
Ank_4
Ank
Ank_3
ResIII
HA2_N
nSTAND3
AAA_22
ANK_LRRK2
ATPase
Cas3-like_C_2
AAA_19
AAA_23
AAA_29
AvrLm4-7
AAA_11
Motif
Other DBs
NCBI-GeneID:
139429645
NCBI-ProteinID:
XP_071051701
LinkDB
All DBs
Position
4:complement(2452786..2463373)
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AA seq
1226 aa
AA seq
DB search
MFKNVTSNQGTFEFKIGNDAKSKLKHFVMNNCNGPTATFNDLHQVVITNGSEGNLCFGDP
PFVNGPSSYEFADFRSNLPVFEMRNFILETIERNSVTIISGETGSGKTTQIPQYLLEYSN
SLNKPCRIICTQPRRISTVAVAERVSIERGERVGETCGYQIKLDCCLGPTTSLIYCTTGV
LLRTLMSGFAVLKNVSYIIIDEIHERNKFTYFVLISLRECIKQFPNLRLILMSATLDVEL
FENYFGNVAKVEVKGRTYPIQHYFLENILLELNYESEQMKLIQKKNSKQNNEIAESNKIN
EVVVVDQDVLREMDEALLHYISIPNEENFIQVLHLILSEEVSVNHQHSGAGYTLLMAAAA
NGHIEFVEKLLNLGADVSLKSQQNCTAIDMAEQNCHNGVVTLIRYFEYMKRQVHNDVLSL
YNQTILEDIIDHDLIVAIITHIHQTEIKNNMGVLVFLPGYEDIMLQLEALSASPVGKFLK
ICVLHGSMMVNAQHDVFKRSQQRKVILSTNVAETSITIDDIAHVIDTGKVKQKSYDSLNG
TSTLETTWISIASLKQRAGRAGRCAPGKCYHIFSRTRYESLLINTIPEILTVPLHELCLQ
TKQLAPHGMKIADFLSKALEAPNTHVIVNAINDLVSLGALDSNESLTVLGSHLLRLCIEP
HLGKMLIYSVIFKCLDPVLTVVATLTHKDPFVLPTKGSEKVEALKRKKSLTCGTFSDHMA
LLMVYQKWQEAKLTKTERKFYREYYVSPSCMDMISATRCHLVSLLRQSGLVPVSSGIRNL
VQFNRSWPIVKAALCAGLYPNVVFSHHNKVVSRNEKRVLMHSTSCLRGTMEYSSGLWFVF
DEMSKLGNLCNLKGVTAVTPLTIVLTAGSTLRFDPESSIMEIDDSLNVNLGGDVVWKFRL
ALNDMIQRHVTQPSAKTTKFETDLLGLFNYVLVIEESYFNLVQPFEFGKRPRLPPGSNGY
LHFNTNGESSNDFDPNMEPNFGDNVERNQQVLKRNFNGIPNDADDNHDHQSGSSKQYQPC
LKTGSSKRQGCGPHSKQPELSHTSGNGANVPSTSQDGVFSDHRRFGIPTNVLIDMTATIG
PVYRFGPSSIFYVIRPLELSNIMISLSQGIWNFAPQTERKVFRSFLENQKTFLLYNVLGT
SEFQALAQLMSTNDGQYNTPAKINWLSTQGVTYDQIRGFFPNGINYFVDGYQISREIGIK
IATLMMERNDQPNVFARPILFRGLDI
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaacgtaacttcaaatcaaggtacatttgaatttaaaattggtaacgacgct
aagagtaaattgaagcatttcgtgatgaataactgtaacgggcccactgctacgtttaac
gaccttcatcaggttgttattacgaatggaagcgagggtaatttatgctttggggatccc
ccttttgtcaatggcccgagttcgtatgaatttgctgattttagaagtaatcttcccgtt
tttgaaatgagaaattttattttggaaacgattgaaaggaattccgttacgattatttcc
ggagaaaccggttcgggaaaaaccacccagattcctcaatacctcttggaatactcaaat
tcacttaataaaccttgtagaattatttgcacgcaaccaaggagaatttccaccgttgct
gtagctgaaagggtttcaattgaaagaggggaacgagttggcgaaacttgtggttaccaa
ataaaattagattgttgcttaggacccacaacttcactaatttattgtacaaccggcgtt
ttattgcgtacattaatgagcggattcgccgttttgaagaatgtatcttacataataatc
gacgaaatccacgaaagaaataaatttacctatttcgttttgatcagtcttcgagaatgt
ataaaacaattcccgaatttgcgtttaatattaatgtcggctacgttggacgtggaatta
ttcgagaattactttgggaacgtcgctaaagttgaagtcaaaggaagaacatatcccata
caacattacttcctcgaaaatatattacttgaattaaattatgagtctgaacagatgaaa
ttgattcagaaaaaaaatagcaaacaaaacaatgaaatagccgaaagtaataaaattaat
gaagttgtagtagtcgatcaagatgtattaagagaaatggatgaagctttattgcattac
atttcaattcctaacgaagaaaatttcattcaagtcttacatcttattttatccgaagaa
gtttctgttaatcatcagcacagtggtgcaggatacacgcttttgatggcagctgcggct
aatggtcatattgaatttgttgaaaaattactaaatttaggtgctgatgtatcattaaaa
tcacaacaaaattgcacagcaatcgatatggctgaacaaaactgccataacggcgtagta
accctgattcgatatttcgaatacatgaagagacaagttcacaatgacgttttaagtctg
tacaatcaaacgattcttgaagacataatcgaccacgatttaatcgttgcgatcatcaca
catatccatcaaactgagattaaaaacaatatgggggttctcgtattccttccgggttac
gaagatatcatgcttcaacttgaagctttatctgcatctcctgttggaaagtttctcaaa
atttgcgtattacacggaagcatgatggttaatgcgcaacacgacgttttcaagcgatcg
caacaacgcaaagtgattttatcaacgaatgttgctgaaacgagtattaccattgatgat
attgcccatgttattgatactgggaaggttaaacagaaatcgtacgattcgttgaatgga
acatctactttggaaactacatggattagtattgcttctttaaaacaaagagccgggaga
gctggaagatgcgccccaggaaaatgttatcatatattttctaggacgcgttatgagtcg
cttttaataaataccataccggaaatactcacggtacctttacatgaactttgcctccaa
accaaacaactcgccccacacgggatgaaaatagccgattttctttcaaaagccctcgaa
gccccaaacactcacgttatagtgaatgcgataaacgatttagtttcgcttggagctctc
gattctaacgaaagcctaaccgttcttggttctcatttacttcgtctctgtatcgaaccc
catttgggtaaaatgctaatctattcggtaatttttaaatgtctcgatcccgttttaacc
gtcgttgctactttgacccataaagatcctttcgttttaccaacgaaaggttccgaaaaa
gtcgaagctctgaaacgaaagaaatcgttaacttgcgggacgttcagcgatcatatggcc
ctgttaatggtgtaccaaaaatggcaggaagcgaaattaactaagacggaaaggaagttt
tatcgcgaatattacgttagtccgagttgtatggatatgatttcggcgacgagatgccat
ttggttagcttgttaaggcagtctggtttggtgccggtttccagtggcattaggaattta
gtacaatttaatagaagttggccaattgttaaagcagcgctatgtgcggggttatatccg
aatgttgtgttttcgcatcacaataaagtggtttcaagaaatgaaaagagggttttaatg
cattcgacttcgtgtcttcgaggaaccatggaatactcatcaggattatggtttgttttt
gatgaaatgtcaaaacttgggaatttgtgcaatttaaaaggagttactgctgttactcca
ttaactattgttttaaccgctggttcaactttgcgatttgatccggaatcgtcaataatg
gaaatcgatgattctttaaatgtgaacttgggtggcgatgtagtgtggaaatttcgactt
gctttaaacgacatgattcaacgtcacgtcacgcaaccatctgctaaaactacaaaattc
gaaacggatcttctcggactttttaattatgttcttgtaatcgaagagtcttattttaat
cttgttcaaccgtttgaatttggaaaaaggccacgactcccaccaggaagcaatggatat
ttgcattttaacacaaacggcgaatcatcgaacgacttcgatccaaatatggaacctaat
ttcggtgataatgttgaaaggaatcagcaggttcttaaaagaaattttaatggaattcca
aatgatgctgatgataatcatgatcatcaaagtggtagttcgaaacaataccaaccttgt
ttgaaaactggttcttctaaacgacaaggttgcggaccacattcaaaacagcctgaattg
agtcataccagcgggaatggagcaaacgttccaagcacatctcaagatggtgtttttagt
gatcatcgccgttttggtattccaacgaatgtgttgattgatatgacagcgactatagga
ccagtatatcgttttggtccgtcgtcgatattttatgttatccgtccattggaattgagc
aatatcatgattagtttatcgcaaggaatttggaatttcgccccgcaaactgagcggaag
gtttttaggagcttcttggaaaatcaaaagacttttcttctatacaacgttctaggaact
tcggaatttcaagctttagcccaattaatgtctactaatgacggtcaatataacacacct
gccaaaattaattggttaagtacacaaggagttacatacgatcaaatcaggggatttttt
ccaaatgggatcaattacttcgtggatgggtatcaaattagtagggagattggcataaaa
atagccacgttgatgatggaacgtaacgatcaacctaacgttttcgcacgtccaattttg
tttaggggtcttgatatttaa
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integrated database retrieval system
