Oncorhynchus tshawytscha (Chinook salmon): 112214184
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Entry
112214184 CDS
T05605
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 6
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112214184
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
112214184
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_13
RHG20_PH
IQ_SEC7_PH
PH_20
MCM_OB
FYVE_2
Motif
Other DBs
NCBI-GeneID:
112214184
NCBI-ProteinID:
XP_042153725
LinkDB
All DBs
Position
LG15:complement(5464868..5493099)
Genome browser
AA seq
1332 aa
AA seq
DB search
MSTGVKKPPVAPKPKLAPSVKLSPPPIAPKPDLLLSQPSQPSPLLTQPSPAALKRAKPAV
APKPCLSKPSAPPAPASPPPLRPRVPQTPSQECSGAGDDSLSFLNSRNGILSQPILRDSD
YIIPTCSCGLQDCSQCKRLGNGNVTVVGSDTLGSWPNGNATESTGTLVVNRPGKTENGDS
EESGGVTNTLHLRLKDKPQRQEGQRDGEGSRDEEKLQGNKEERQRNQKGQEGQQYQTGSG
DQSCNVLEVAETLTQTETKASNAEHTYTDSCNIDCNETDTIPTPLILPLEVSPIRTPPQT
VPPTRTPSQTVPPTRTPSQIVPPTRTPPHILPPHPRPLPGGQTAWRPAPMRGDKEPHTGG
EVGESEGSGGRCVTSEKEEHTQGVYDSPSPSQGPEVEEEPHPVPPPRQKSLSPRLHRAIH
CPPSLNRNTSHSLDLLSQPELNALTSERRGGGGEEEEEKEEEVEEGYGDFERYPITRSLP
KQIKLSCRPPPVGMTMKASSAEEGGSPRAPPRKPQRHSLPAGAPPSITPPPPPPHHTNTP
MRELPATPQEKPAWRFPRPFFSRQSSSRHSSGSSSRGPPQRKAALLGGKQRAQSFSSADL
LARADGTKRSLSFRKLLELRLSVRMLPRLLTRSGESLDCTSVEPGGRTGMVDQSNGSAGV
SGGDGEGSVEYENVPLYEEIPEYMNLPFLSARLGWPLTHSLDPSTHRHSDSDVYEVQDPY
ESHCDYKRPHSIDYERGWHGLDDAHSEEEVHSSDEDDNSSTSSKEHLELSEEDRQQEDEV
KRKKLVHIAQEIMSSEKVFVDVLKLLHIDFRDAVAKATRQNGKPVVEERILTQILYYLPQ
LYQLNRDLLRELEERVAHWGDHQRLADIFVQKGPYLKMYSTYIRQFDNNVAMLDEQCKKN
PGFATVVREFEMSPRCASLALKHYLLKPVQRIPQYQLLLTDYLKNLPEDSSDYKDTQAAL
GIVKEVANHANDIMKQGDNFQKLMHIQYSLNGQHEIVQPGRVFLKEGTLMKLSRKVMQPR
MFFLFNDTLLYTTPVQSGQYKLNSMLSLAGMKVSKPSQEAYQNELNIESVERSFILSASS
ATERDEWLAAIATAIDDHTRKKITFISSRSQEEADGVCDSGAPLGSKAPIWIPDLRATMC
MVCTCEFTLTWRRHHCRACGKVVCQTCSSNKFYLEYLKNQPARVCDHCFVKLQENSDRVA
SGALSPTARSGGFSFSRKQKKIPAALKEVSANTENSSMSGYLQRSKGNKKQWKRLWFVIK
NKVLYTYAASEDVAALESQPLLGFFLREEKCGPFQKLQFKLYHKNTLFYIFKADDIPTAQ
RWIEAFQEAMIL
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaggtgtgaagaagccgccagtggctcccaaacccaaactcgccccctcggtg
aagctctcgcctcctcccatcgctcccaaacctgatcttctcctctcccagccttcccaa
ccctccccccttcttacccaaccctcccctgccgcgctaaagagagccaaacctgctgtg
gcgcccaaaccatgcctctccaaaccctctgcccctccagccccggcttctcccccaccc
ctcagacccagagtaccccaaaccccatcccaggagtgcagcggggctggggacgacagc
ctctccttcctcaactccagaaacgggatcctgtcgcagcccatcctgcgcgactcggac
tacatcattcctacgtgctcctgtggactccaggactgctcccaatgcaaacgactaggg
aatgggaacgttacagtggtcgggagcgatacgctcggctcctggccaaacgggaatgcc
acggaaagcactggaacgctggtagtcaatcggccgggtaaaacagagaacggagacagt
gaggagagcggaggagtgaccaacaccctccatctcaggctcaaggacaaacctcagaga
caggaggggcagagggatggagaggggagcagggatgaggagaagctgcaggggaacaaa
gaggagagacagaggaaccagaaaggacaggagggtcagcagtatcagactggttcaggg
gaccagtcatgtaatgttcttgaggtggcagagacacttacacagactgagactaaagct
tctaatgcagaacatacatacactgacagctgtaatatagactgcaatgagaccgacacc
attcccactcccctcatcctcccactggaagtctcccctatccgcacccccccacagaca
gtccctcccacccgcaccccctctcagacagtccctcccacccgcaccccctctcagata
gttccacccacccgcacccccccacacattttacccccccaccctcgccccctcccaggt
ggacagacggcctggaggccagcacccatgaggggagacaaagaaccgcacacaggggga
gaggtgggggagtctgaggggagtggggggagatgtgtcacctcagagaaggaagaacac
acccagggagtgtatgacagtccctctccctcccagggccctgaagttgaagaggagcct
caccctgtgcctccacctagacagaagtccctctccccccgcctccacagagccatccac
tgtcccccctccctcaaccgaaacacctcccactctctagacttgctctctcagcctgag
cttaacgcactgacctcagagagaagaggaggaggaggggaggaagaggaggagaaggaa
gaagaagttgaggaagggtacggagactttgagcgctaccccatcacccggagcctgccc
aaacagatcaagctcagctgccgcccgccccccgtcggtatgacaatgaaggccagctca
gcggaagagggagggtcacccagggccccgcccaggaagccccagagacacagcctgcca
gcgggtgcccccccgtccatcacaccccctccaccccctccgcaccacaccaacaccccc
atgagggagctgcctgccaccccacaggagaaaccagcctggcgcttcccaaggcccttc
ttcagcaggcagagctcctccagacacagcagcggcagcagcagccgagggcccccccag
aggaaagcagctctgctgggagggaaacagagggcccagtccttctcctcggctgacctg
ctggcccgcgccgacggcaccaagaggagcctttctttccggaagcttctggagctgcgg
ttgtctgtcaggatgttgccacggttactgaccagaagcggcgagtctctggattgtacc
agcgtggagccgggcggacggacggggatggtggaccagtccaatggcagcgcgggggtg
tctggcggggatggagaggggtcggtggagtatgagaatgttcctctgtatgaggagata
ccggagtacatgaacctgcctttcctcagcgcacggctgggctggccactcacacacagt
ctggacccaagcacacacagacacagtgactcagacgtctatgaggtgcaggatccatac
gagagccactgcgactataagcgaccccattccattgactatgagaggggctggcatgga
ttggatgatgctcactctgaggaggaagtccacagctctgacgaggatgacaacagctcc
acctcaagcaaggagcacctggagctgtcagaagaagacagacagcaggaggatgaggtg
aagaggaaaaagctggtgcatatcgcccaggagatcatgagctctgagaaagtgtttgtg
gacgtcctgaagcttcttcacatagatttccgggacgcagttgccaaggcgacacgacag
aacggcaagccggtggttgaagagcgtattctaacccagatcctctactacctgcctcaa
ctataccagctcaaccgagacctgctccgggagctagaggagagagtggcccactggggg
gaccaccagaggctggcagacatctttgttcagaaggggccgtacctgaagatgtactcc
acctacatccggcagtttgacaacaacgtggctatgctggacgaacagtgtaagaaaaac
cctggcttcgcaactgtggtccgggagtttgagatgagtcctcgatgtgccagcctggct
ctgaagcactacctgctgaaacctgtacagagaatcccccagtatcagcttctgctcaca
gattatctgaagaaccttcctgaggactcgtctgactacaaagacacgcaggctgctctg
ggcatagtgaaggaggtggccaaccatgccaacgacatcatgaaacaaggggataacttt
cagaagctgatgcacattcagtacagtctgaacggacagcatgagattgttcagccgggc
agggtgtttcttaaggagggcactctgatgaagctgtccaggaaggtcatgcagccacgg
atgttcttcctgttcaatgacactcttctgtacaccactccagttcagtctggtcagtat
aaactcaacagcatgctctctctggcgggaatgaaggtgagtaagcccagtcaggaggcg
tatcagaatgaactgaacattgagagtgtggagcgttccttcatcctgtctgccagctcg
gccacagagagagatgagtggctggcggccatcgccacggcgatagacgaccacaccagg
aagaagatcaccttcatctccagccggagtcaggaggaggctgatggtgtgtgtgacagt
ggggccccgctgggttctaaggcccctatctggatcccagacctgagggccaccatgtgt
atggtctgtacctgtgagttcaccctcacctggagacgccaccactgccgagcctgcggg
aaggttgtgtgtcagacgtgctcgtccaataagttctatctagagtacttgaagaaccag
ccggctcgtgtgtgtgaccactgcttcgtcaagctacaggagaacagtgaccgtgttgct
tctggggcgctgtctcctactgccagatctgggggattctctttctccaggaaacagaag
aagatcccagctgctctcaaagaggtgtctgcaaacacagagaactcctccatgagtggc
tacctacagaggtcgaagggcaacaagaagcaatggaagaggctatggttcgtcatcaag
aacaaagtcctgtacacctacgccgccagcgaggacgtagctgctctagagagccagcct
ctgctaggcttcttcctgcgggaggagaagtgtggccctttccagaagctgcagtttaaa
ctgtaccacaaaaacaccctgttctatatcttcaaggctgacgacatccccactgcacag
aggtggatagaggctttccaggaggccatgattctttaa
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