Oncorhynchus tshawytscha (Chinook salmon): 112214196
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Entry
112214196 CDS
T05605
Name
(RefSeq) kelch-like protein 42
KO
K27973
kelch-like protein 42
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112214196
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
112214196
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Gene cluster
GFIT
Motif
Pfam:
Kelch_1
Kelch_6
Kelch_3
BTB
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_5
BTB_KLHL33
Kelch_4
NANM
BACK
Motif
Other DBs
NCBI-GeneID:
112214196
NCBI-ProteinID:
XP_024228546
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All DBs
Position
LG15:5609923..5613525
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AA seq
469 aa
AA seq
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MSSEQIIVIVMDDKTYNVNKGKLIEKSDYFRALYSSGMRESREDSVQLQGLSVPGLELVL
EFINTSKVKVVNETLEDLIETASFLQVTSILKLLSSEIRQENCVELYSLSEVYGTHDLRN
ACLRYMSCHYHPMLRRPEFSDLPAALRNQVREMRMKGTATLVAIGLFTCLALDLPDQDEP
WSMLRYGEVEQRWKPLANNLPSDMVNVRGYGSAVLDNYLFIVGGYRMTSQEISAAHCYNP
CRNEWNQVAPLNQKRSNFKLLAVRGKLYAVGGQCQGTVECYSPEQDWWTCVSSLPDPLAE
FSACECQGMIYVMGGYTARDRNTSVLRYCPTSDSWTVFRSCSAHVRKQQMLSVEDTIYLV
GGYTHELEPGPGRRASQTEDMLTVQSYNVITGEWLHLKDNTSKSGLNLTCTLHNDGVYIM
SRDVSLPTSLEHRVFLKYNIFSDAWEAFRRFPALGQNMLLCSLYLPNVL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgaacaaataatcgtaattgtcatggatgacaaaacgtacaacgtcaacaaa
ggcaagttgatagaaaaaagcgactacttccgtgcactgtacagctctgggatgcgcgag
tccagagaggattcagtgcaactgcaggggctgagtgtgccagggctggagctggtcctg
gagtttatcaacacctccaaagtgaaagtagtcaacgagaccctggaagacctgattgag
actgcatcttttttgcaagtcacctctatcctaaaactcctttcgtctgaaattcgacaa
gagaattgtgtggaactctacagcctatctgaggtatatggaactcatgatctacgcaac
gcttgtctcagatatatgagctgtcactaccacccgatgctgcggagaccagagttcagc
gacttacctgctgccctgcgcaaccaggttagagagatgcgtatgaaaggcacagccact
ctggtggctatcggacttttcacctgtctggctctggacctaccagaccaggacgagccc
tggtccatgctgaggtatggggaagtagagcagcgttggaagccactcgctaacaacctg
ccctctgacatggtcaatgtgagaggctacggctcggccgtgttggacaactacctgttc
attgtcggtgggtacagaatgaccagccaggagatctcagcggcacactgctacaacccc
tgtagaaatgaatggaaccaggtagcccccctgaaccagaagaggtccaacttcaagctg
ctggcggtacgagggaagctgtatgcagtgggaggccagtgtcagggcactgttgagtgc
tacagccctgagcaggactggtggacctgtgtgtcgtcactacccgaccccctggcagag
ttctctgcctgcgagtgccagggcatgatctacgtcatgggaggatatactgccagagac
aggaataccagcgtactccgctactgccccacctctgacagttggacagtgttccgctcc
tgctcggcccacgtgcgtaagcagcagatgctctcggtggaagataccatctacttggtg
ggggggtacacccacgagctggagccgggtccggggcggcgggccagccagacggaggac
atgctgacagtgcagtcttacaacgtgatcacgggggagtggctccacctgaaggacaac
acctccaagtcgggtctgaacctcacgtgcacgctgcacaacgacggcgtctatattatg
tcgcgcgacgtcagcctgcccaccagcctggagcaccgcgtcttcctcaagtacaacatc
ttctcagacgcctgggaggccttcagacgcttccccgcgctgggccagaatatgctactc
tgctccctctatctgcccaacgttctatga
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